KEGG   Macadamia integrifolia (macadamia nut): 122082326
Entry
122082326         CDS       T07436                                 
Name
(RefSeq) DNA ligase 1 isoform X1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
ming  Macadamia integrifolia (macadamia nut)
Pathway
ming03030  DNA replication
ming03410  Base excision repair
ming03420  Nucleotide excision repair
ming03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ming00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    122082326
   03410 Base excision repair
    122082326
   03420 Nucleotide excision repair
    122082326
   03430 Mismatch repair
    122082326
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ming03032]
    122082326
   03400 DNA repair and recombination proteins [BR:ming03400]
    122082326
Enzymes [BR:ming01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     122082326
    6.5.1.6  DNA ligase (ATP or NAD+)
     122082326
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     122082326
DNA replication proteins [BR:ming03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    122082326
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     122082326
DNA repair and recombination proteins [BR:ming03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     122082326
   NER (nucleotide excision repair)
    Other NER factors
     122082326
   MMR (mismatch excision repair)
    Other MMR factors
     122082326
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase HTH_36
Other DBs
NCBI-GeneID: 122082326
NCBI-ProteinID: XP_042505747
LinkDB
Position
6:35072530..35088253
AA seq 762 aa
MLRHCLVSQTRLFPIPRPFPLLSRGFSAAFTPKPFTCFVFSSTPKSSMSERRSINDVLMA
SARASASRKKAPPPSPKKPKTLEDKDTKVVSENNQQQPDEPSSKKAKTAVEDRSLSLDDR
IAQLKKKSSDFTPKSAAYWKDGEPVPFLFLARAFDFIGQEKGRIATTELLCNVFRTVMAT
TPSDLVAVVFLSANKVAPSHEGVELGLGDSALNKVLAEAYGRSEAQIKKQTEELGDLGLV
AKASRSSQSLMFKPKPLTVSRVFDTFRIIAKESGKDSQDKKRRHIRDLLIAATDCEPQYL
IRLLQSKLRIGLAEQTLLVALGYAAVYSEQQSTPSSQIQSRLEEAAKIVKQIYSVVPNYD
QIVSALLADGVWKLSETCCFTLGVPVGPMLAKPTKGVSEILDKFQGMEFTCEYKYDGERA
QIHYMEDGSVEIYSRNAERNTAKFPDVVLAVTRVKKPSVKSFVLDCEVVAYDREKQKIQP
FQILSTRARKGVALSDVKVEVCIFAFDLLYINGKPLLPEQLNVRRQHLYDSFEIEPGVFE
FAKAITSDDLEVIQKFLEDAVETSSEGLIVKTLNRDATYEPSKRSHNWLKLKKDYMDSIG
DSLDLVPIAAFHGRGKRTGVYGAFLLACYDDKNEEFQSICKIGTGFSEAMLEECSNSLRT
KVIPKPKPYYRCGDTINPDVWFEPSEVWEVKAADLTISPVHCAGIGVVDPNKGISLRFPR
LLRVRKDKIPEQATSSDQVADMYRAQKNNGTNNQDDDENGDD
NT seq 2289 nt   +upstreamnt  +downstreamnt
atgcttcgccactgtttggtaagccagacgcgacttttccctattcctcgaccatttcct
ctcctctctcgcgggttctctgctgcattcactcctaaaccctttacttgcttcgtcttc
tcttcaactcccaaatcttcaatgtccgaacgccgttccatcaacgatgttcttatggcc
tccgctagggcatctgcttctcgcaaaaaggctcctcctccttcgcccaagaaacccaaa
accctagaggacaaagacactaaagttgtatcagaaaacaaccaacagcaacccgatgaa
ccctcgtccaagaaggcgaagacggctgtggaagatcgatctctcagtttggacgaccgc
attgcccaattgaagaagaagtcgtcggattttacaccgaagtccgctgcatattggaaa
gatggagaacccgtcccgtttctgtttcttgctcgcgcgtttgatttcatcggtcaagag
aagggtcgaattgccaccacagaacttctctgtaatgttttccggactgtgatggctact
accccaagtgatttggttgctgttgtttttctttccgcgaataaggttgctccgtcgcac
gaaggcgttgagcttggacttggagattctgccctaaataaagttctcgctgaagcctat
ggaagaagtgaagcacaaatcaagaaacaaacagaagaactgggagatttgggccttgtt
gcaaaagcaagtcgttcatctcaaagtttgatgttcaagcctaaacctttaactgtttca
agggtttttgatacatttcgtatcattgctaaggaatctgggaaggacagtcaagacaag
aaaagaagacatatcagggaccttcttattgcagctactgattgtgaacctcaatattta
attcgcctattgcagtcaaagctacgaattggtttggcggagcagactctcctagtggct
ctgggatatgctgctgtttactctgaacaacaatctacaccttcctcacaaattcaatct
cgtcttgaagaggctgcaaaaattgtcaaacaaatatactctgtagttcctaactacgac
caaattgtatctgctcttctcgctgatggtgtatggaagctttcagagacttgttgcttt
acattgggtgttccagttggacctatgctagctaaaccaaccaaaggggtatcggagatt
ttggataaattccagggtatggaattcacttgtgaatacaagtatgatggagaacgtgcg
cagatacattacatggaggatggttctgttgagatatacagtcgaaatgcagaacggaat
acggcaaagtttcctgatgttgtccttgcagttacaagagtgaagaaaccctctgtaaaa
tcatttgttctggactgcgaagttgttgcgtatgaccgtgaaaaacagaagattcagcct
ttccagatcctcagtactcgtgctcgtaaaggggtggccttgagtgatgtaaaagttgaa
gtttgcatctttgcttttgatttattgtatatcaatggaaagccattacttccggagcag
cttaatgttcgtagacagcatctttatgattcatttgagatagaaccaggagtttttgag
tttgcaaaagcaataacatctgacgatcttgaagtaatacagaagtttcttgaagatgct
gttgagaccagttctgaaggtctgattgtgaaaacattaaatagggatgctacatatgaa
ccttcaaaacgatcccacaattggctgaaattgaaaaaggattacatggacagcattggt
gactcattagatttagtacctattgctgcattccatggtcgtgggaaacgtacaggagtc
tatggtgcctttctccttgcttgttatgatgacaagaatgaagaatttcaaagtatttgc
aaaataggcactggattttccgaagcaatgcttgaggaatgttctaatagtcttcgtact
aaagtgatccccaaacccaagccatattatcggtgtggagatacaatcaatccagatgtg
tggtttgaaccatctgaggtttgggaggtgaaagctgcagatttgaccattagccctgtt
cattgtgctggaattggtgttgtggatccaaataagggcatctctctccgatttccacgt
ctacttcgtgtgcgaaaagataaaatcccagagcaagcaacatcatctgatcaggttgct
gatatgtatcgtgctcaaaagaataatggtactaacaatcaggacgatgatgagaatgga
gatgattaa

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