Micromonas commoda: MICPUN_58886
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Entry
MICPUN_58886 CDS
T02695
Name
(RefSeq) DEAD/DEAH box helicase
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
mis
Micromonas commoda
Pathway
mis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MICPUN_58886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mis03041
]
MICPUN_58886
03009 Ribosome biogenesis [BR:
mis03009
]
MICPUN_58886
Enzymes [BR:
mis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MICPUN_58886
Spliceosome [BR:
mis03041
]
Complex A
U1 snRNP components
U1 related factors
MICPUN_58886
Complex B
MICPUN_58886
Ribosome biogenesis [BR:
mis03009
]
Eukaryotic type
Pre-60S particles
Helicases
MICPUN_58886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
8243576
NCBI-ProteinID:
XP_002502660
JGI:
MicpuN3_58886
UniProt:
C1E750
LinkDB
All DBs
Position
5:complement(1264733..1266568)
Genome browser
AA seq
611 aa
AA seq
DB search
MGVSQEVKKAKKAARQKAAAEANAQRAAAFKAALAEGRDPNEAAAAVEDPHAPLNGKKRK
STEDVAHELLAAAVAEGEQDAAAKKAAKRAAKRAKKAAAAGDGENDSDASVERPATPGVP
GEPIAKAAAKLTEEEVAAYREEHAIKVPQGTPDPITRFEDAPFPRKLVAALLKQGYESPT
PIQAQAWPIAVKGKDVIAIAKTGSGKTCGFLLPALAKIVKQGATAAPDMEMVDGRFRPAA
VVPHAIVLAPTRELAIQIGDECAKFCPAAGAKVVTLYGGASKGDQLRALRSGADVLVATP
GRLHDFLAPPPGFSAPVSARNAHYVVLDEADRMLDMGFEPQIKKIIKMCPTARQTLMFTA
TWPDGVRKIADTFLQPDAALVRIGDGGDRLTANKSITQTIEIVTEDQKLDRAIAVLKENL
VDGARGIVFCGTKRRCDFIDRKMKAMGLRSAGAIHGDKDQAEREYSLDLFRKGKAPLLVA
TDVAARGLDIPGVTVVLVYDFPLQVEDYVHRIGRTGRAGKEGKAHCFFTEEDAGAARELV
QILEGAEQEVPERLREMADRSRKSFKGKGGRGGGRGGRGGGRGRGGFGGRGGGGRGGGGR
GGGRGGFKNKW
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgagtcaggaggtcaagaaggccaagaaggctgcccggcaaaaggcggccgcc
gaggccaacgcccagcgagcggctgcattcaaggcggcactcgccgaggggcgcgacccg
aacgaggccgccgccgccgtcgaggacccacacgccccgctcaacggcaagaagcgcaag
tccaccgaagacgtcgcgcacgagctcctcgcagccgccgtcgccgagggcgaacaggac
gccgccgccaagaaggcggccaagcgggccgccaagcgggccaagaaggcggccgccgcc
ggcgacggcgagaacgattccgacgcctccgtcgagcgccccgccaccccgggcgtcccc
ggcgagcccatcgcgaaagccgccgccaagctcaccgaggaggaggtcgccgcctatcgc
gaggagcacgccatcaaggtgccccagggcacccccgaccccatcacccgattcgaagac
gccccgttcccgcgcaagctcgtcgccgcgttgctcaagcagggttacgagtccccgacg
cccatccaggcgcaggcgtggcccatcgccgtcaaggggaaggacgtcatcgccatcgcg
aagacaggcagcggcaagacgtgcgggttcctcctcccggcgctcgccaagatcgtgaag
cagggcgccacggcggcgccggacatggagatggtcgacggcaggttcaggcccgccgcc
gtggtaccgcacgcgatcgtcctcgccccgacgcgagagctcgccatccagatcggcgac
gagtgcgccaagttttgccccgccgctggagccaaggtggtgaccctctacggaggcgcg
tccaagggggaccagcttcgcgcgctgcgatcgggagcggacgtgctcgtcgcgacgccg
gggaggcttcacgatttcctcgcaccgccgcccgggttctccgcgcccgtgtccgcgagg
aacgcgcactacgtggtgctggacgaggcggatcgcatgctggacatgggattcgaaccg
cagatcaagaagatcatcaagatgtgcccaaccgctcggcagacgctgatgttcaccgcg
acgtggcccgacggcgttcgtaagattgccgacacgtttctccaaccggacgcggcgctc
gtgcgcataggcgacggcggcgaccgtctgaccgcgaacaagtccatcacgcagacgatc
gagatcgtcaccgaggaccagaagctcgacagggccatcgcggttctcaaggagaacctc
gtggacggcgcgaggggcatcgttttttgcgggaccaagcgccggtgcgactttatcgat
cgcaagatgaaggcgatgggcctacgatccgcgggggcgatccacggcgataaggaccag
gccgagcgcgagtactcgctcgacttatttcgcaaggggaaggcgccgctgctcgtcgcc
acggacgtcgcggcgcgcggcctcgacatccccggcgtcaccgtcgtgctggtgtacgat
ttcccgcttcaggttgaggattacgtacacaggatcgggcgcacgggccgcgcgggcaag
gagggcaaagcgcactgcttcttcaccgaggaggacgccggcgccgcgagagagctggtg
cagatcctggagggtgccgagcaggaggttcccgagaggcttcgggagatggcggacagg
agcagaaaaagcttcaagggaaagggggggcggggcggcggcaggggtggacgcggcggc
ggtagggggcgcggtgggttcggaggacgcgggggcggtggacgcgggggcggcggcagg
ggcggcggcaggggcgggttcaagaacaagtggtga
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