Micromonas commoda: MICPUN_96893
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Entry
MICPUN_96893 CDS
T02695
Name
(RefSeq) predicted protein
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
mis
Micromonas commoda
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mis03009
]
MICPUN_96893
Enzymes [BR:
mis01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
MICPUN_96893
Ribosome biogenesis [BR:
mis03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MICPUN_96893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-GeneID:
8250279
NCBI-ProteinID:
XP_002507354
JGI:
MicpuN3_96893
UniProt:
C1FEQ4
LinkDB
All DBs
Position
1:join(1834967..1834999,1835102..1835935,1836007..1836213)
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AA seq
357 aa
AA seq
DB search
MALCSPLRGVKSDALSGHRSDFQGEEEVFVARASSSRLDAFLADQISGVSRSRIVESIKS
GVVVVNGNVTTKPSHKLDIGDRVICGEIVASPPTEVAPENIPLDVVFEDDHLVVVNKPPG
MVVHPSAGHAGGSLVNALLFHCNERSNRGDDASKMIDVPRLGVVHRIDKGTSGLLVMAKD
AAAQAGLQTQFANRSVRRRYLAIVLGTPARESGRIDAPIGRDPADRLKMAIVRGATGRQA
ISNFGVRARLVRGNASLVEWQLETGRTHQIRVHAREMGHPIVGDEAYGGGGSAAAEFLRR
DGAMSAAAAREIVAKCARPMLHARSLGFRHPVTGEEISFAVEPPPDFVDAFTELSKY
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcgctttgctcgccgctccgcggcgtcaaaagcgacgcgctctctgggcatcggtcg
gatttccagggtgaggaggaggttttcgtcgcgcgcgcgtcttcgtcgaggctcgacgcc
ttcctcgcggaccaaatatcaggagtgagtcgaagtcgaatcgtcgagagcatcaagagc
ggcgtcgtcgtcgtcaacggtaacgtcacgaccaagccttcgcacaagctcgacatcggg
gacagggtgatttgcggggagatcgtcgcgtcgccacccacagaggtcgcccccgagaac
atcccgctggacgtcgtgttcgaggacgaccacctcgtcgtcgtcaacaaaccaccgggc
atggtggtgcatccatccgcgggacacgcgggcggaagcctggtgaacgccctcctgttc
cactgcaacgagaggtcaaaccgaggagacgacgcctcgaagatgatcgacgtcccacga
ctcggagtcgtgcaccgaatcgacaagggcacctccggactgctggtgatggccaaggac
gccgccgcgcaggctggcctgcagacgcagttcgcgaataggtccgtcaggcgacggtat
ctcgccatcgtcttggggactcccgcacgggagagcggtcggatcgacgcgccaatcggc
cgagacccggcggatcggttaaaaatggcaatcgtccgcggcgcgacgggacgacaggcg
atcagtaacttcggcgtccgcgctcgactcgtgcgcggtaacgcgtcgctcgtggagtgg
cagctcgagacggggcggacgcaccagattcgcgtgcacgcgcgggagatgggacatccc
atcgtcggagacgaagcctacggggggggcggatcggcggcggcggagtttctgcgacga
gacggggcgatgtcggcggctgcggcgagagaaatcgtcgcaaagtgcgcgcggccgatg
ctgcacgcgcggtcgctgggtttccggcatccggtcaccggcgaggagatcagtttcgcg
gtcgaaccgccgcccgatttcgtcgacgccttcaccgagttgtcgaaatattag
DBGET
integrated database retrieval system
