Microvirga sp. 17 mud 1-3: C4E04_15930
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Entry
C4E04_15930 CDS
T05470
Name
(GenBank) hydrophobe/amphiphile efflux-1 family RND transporter
KO
K18138
multidrug efflux pump
Organism
miv
Microvirga sp. 17 mud 1-3
Pathway
miv01501
beta-Lactam resistance
miv01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
miv00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
C4E04_15930
01503 Cationic antimicrobial peptide (CAMP) resistance
C4E04_15930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
miv02000
]
C4E04_15930
01504 Antimicrobial resistance genes [BR:
miv01504
]
C4E04_15930
Transporters [BR:
miv02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
C4E04_15930
Antimicrobial resistance genes [BR:
miv01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
C4E04_15930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
AWM88088
UniProt:
A0A2Z3I865
LinkDB
All DBs
Position
complement(3383982..3387116)
Genome browser
AA seq
1044 aa
AA seq
DB search
MSTFFINRPIFASVLSIVILLAGLLAMRVLPIAQYPEIVPPQVVVSATYPGASAQTIAET
VAAPLEQQVNGVEDMIYMQSTSTGSGTMSLAVYFKTGTDADQATINVNNRVQRATAVLPE
EVRRQGVTVTKQSSSILQIVTLSSPDRRYDTIYISNYALVNIIDELRRTPGVGDASFFGA
SDYSMRIWLKPDKVAQYNLTPGDIANAIREQNAQFAAGRFGEEPMPGSQAFTYSVTTQGR
FADPREFEQIILRSDENGGALRLKDVARVELGSQNYSTVSTLNGAPTVPIGIYLQPDANA
LEVSRAIESAMERLSRRFPDGLRYDVPFNTTLFINASIEAVVHTFIEAIILVVVVVFLFL
QNWRATVIPVLAVPVSIIGTFAGMYLLGFSINLLTLFGLILAIGIVVDDAIIVLENVERI
MSSEGKSPREAAIQAMHEVSGPVVAVVLVLCAVFIPVSFLGGLAGELYRQFAVTIAVSVV
VSGIVALTLTPALCAVFLKEGHQEPWLPFRVFNRGFDWLTQRFVGGTAFFLRRALAVLAI
IVLMFGATWWLFQRVPGGLVPAEDQGSFFLVTMLPPAASLDRTIAVTAKVTEGAMQNPAV
ADVVTISGFDFLSGAQKTNAGVSFVTLKDWSERTDPSLDARNLAPSFAALNANFRDGVVI
GFNPPPIMGLSTTGGFEFYLQDRSGGNLESLAQAAQQVIQAASQRPELAGVSTTFNTGVP
QYRIDVDRDKAKALGVPITTIFDTMQSTFGSLYVNDFSLFGRTYRVSLSSEAQFRQTPDD
LRHVFVRSANDTMVPLNALVSATRIVGPDVVDRFNVFPAAKIQGNPAPGYSSGQAIAAME
QVVAQTLSSDYSIGWTGSAYQELQSAGTGTQGFVFGLIMVFLILAAQYERWSLPFAVIAA
VPFAVFGAILAIWLRGIENDIYFQVGLVTLIGLAAKNAILIVEFATERYRAGMPAYEAAL
EAARLRFRPIVMTSLAFILGVVPLATATGASSASRHSIGTGVIGGMLAATFLAIFFVPLF
FRLVTRDRKRQEPAEAPAPPAPAE
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgttcttcatcaaccgcccgatcttcgcctcggtcctgtccatcgtcatcctg
ctggccgggctcctcgccatgcgggtcctgccgatcgcgcaatatcccgagatcgttcct
cctcaggtcgtggtttcggcgacctatccgggcgcgagcgcccagacgattgccgagacc
gtggcagcgcccctggagcagcaggtcaacggcgtcgaggacatgatctacatgcaatcg
acctccacggggtcgggcaccatgagcctggcggtctatttcaagacgggcaccgatgcg
gaccaggcgaccatcaacgtcaacaaccgcgtccagcgcgcgacagcggtcctgcccgaa
gaggtgcggcgacagggcgtcacggtcacgaagcagtcatcgtcgattctgcagatcgtc
accctgtcgtccccggatcggcgctacgacacgatctacatctcgaactacgcgctcgtg
aacatcatcgacgagctgcggcgaacgcccggcgtaggcgatgcctccttcttcggcgct
tccgactattcgatgcgcatctggctcaagcccgacaaggtcgcccagtacaacctcacg
ccgggcgacattgcgaacgccatccgggagcagaacgcccagttcgcggcgggccgcttt
ggcgaggagccgatgcccggcagccaggccttcacctattcggtgacgacacaggggcgc
tttgcggatccgcgcgagttcgagcagatcatcctgcgctccgatgaaaacggcggggcg
ctgcggctgaaggacgtggcgcgggtcgagctcggctcgcagaactactcgaccgtctcg
accctcaacggagcgccgacggtgcccatcggcatctatctccagcccgacgccaatgcg
ctggaggtctcgcgggccatcgagtccgcgatggagcggctctcgcggcgtttccccgac
gggttgcgctatgacgtgccgttcaacaccacgctcttcatcaacgcatcgatcgaggcg
gtggtccataccttcatcgaggccatcattctggtggtcgtggtggtcttcctgttcctg
cagaactggcgggcgacggttatcccggtcctcgccgtaccggtctcgatcatcggcacc
ttcgcgggcatgtatctgctcggcttctccatcaatctcctcaccctgttcgggctcatc
ctggccatcggcatcgtggtcgacgatgccatcatcgttctggagaacgtcgaacggatc
atgtcgtcggagggaaagagcccgcgcgaggcggcgatccaggcgatgcacgaggtcagc
gggccggtggtggccgtcgtgctcgtgctctgcgcagtgttcatcccagtgtcgttcctc
ggcgggctggccggcgagctctaccggcaattcgccgtcaccatcgcggtgtcggtggtc
gtgtccggcatcgtggccctgaccctgacgccggccctgtgcgcggtctttctcaaggag
ggacatcaggagccctggctgccgttccgcgtcttcaaccgcggcttcgactggctgacc
cagcgtttcgtcggcggcaccgccttcttcctgcggcgcgccctggcggtcttggccatc
attgtcctgatgtttggggccacctggtggctgttccagcgggtcccgggagggctcgtg
ccggcggaggatcaggggtccttcttccttgtgacgatgctgccgccggccgcttccctc
gaccggacgatcgccgtcaccgcgaaggtcaccgaaggggcgatgcagaacccggccgtg
gccgacgtggtgacgatttcaggcttcgatttcctgtccggggcgcagaagaccaatgcg
ggcgtgtccttcgtcaccctcaaggactggtcggaacgcacggatccgagccttgatgcg
cgcaatctcgcgccgtcttttgcagccctcaacgccaatttccgtgacggggtcgtgatc
ggcttcaacccgccccccatcatgggcctgagcaccacgggcggtttcgagttctatctt
caggaccgctccggcggcaatctggagagcctcgcccaggcggctcagcaggtgattcag
gcggccagccagcgcccggagcttgcgggtgtctcgaccacgttcaacacgggtgtgccc
cagtaccggatcgatgtcgaccgggacaaggcgaaggcgctgggcgtgccgatcacgacc
atcttcgacaccatgcagagcacgttcgggagcctgtacgtcaacgatttcagcctgttc
ggccgcacctatcgggtgagcctgtcgtccgaggcccagttccgtcagacgccggatgat
ctgcggcacgtcttcgtgcgttccgccaacgacacgatggttcctctgaacgctctggtt
tcggccacccgcatcgtcgggccggatgtagtcgaccggttcaatgtcttcccggcggcg
aaaatccagggcaatccggcgcctggctattcgtccggccaggccatcgcggccatggag
caggtggtcgcccagaccctctcgtccgattactccatcggctggactggatccgcctat
caggaactgcaatcggccggaacgggcacgcaagggttcgtgttcggcctcatcatggtg
ttcctgatcctggcggcgcagtacgagcgctggtcgctgccgttcgcggtcatcgcggcg
gtcccgttcgcggtctttggcgccatcctggccatctggctgcgcggcatcgagaacgac
atctatttccaggtcggtctcgtcaccctcatcggcctggcggccaagaacgcgatcctg
atcgtcgagtttgcgacagagcgctaccgcgccggaatgccggcctacgaggccgccctt
gaggcagcgcggctccggttcaggcccatcgtcatgacctcgctcgccttcatcctcggt
gtcgtgccgctggcgaccgcgacgggcgccagttcggccagccgccactccatcggcacg
ggcgtgatcggcggcatgctggccgcgaccttcctggcgatcttctttgtcccgctgttc
ttccgactggtgacgcgcgacaggaaacgccaggagcctgctgaggcgccggctcctccg
gcgccggccgaatga
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