Methanocaldococcus jannaschii: MJ_1401
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Entry
MJ_1401 CDS
T00003
Name
(GenBank) putative ATP dependent RNA helicase
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
mja
Methanocaldococcus jannaschii
Brite
KEGG Orthology (KO) [BR:
mja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mja03019
]
MJ_1401
Messenger RNA biogenesis [BR:
mja03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
MJ_1401
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF5814
DEAD
Helicase_C
ResIII
Helicase_dom4_arc
Motif
Other DBs
NCBI-ProteinID:
AAB99409
UniProt:
Q58796
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All DBs
Position
1360254..1362680
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AA seq
808 aa
AA seq
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MLIVRKPKKKKDEIEIVKVGGKIEDGIEVKNNQKIFANYKKVGDKYKLYRCRVGDKLIQP
SKVLELLKSDKIFILKENEEEIEEVLKSYNLKFDYIELCPFCLLKNIYKRLTRNNRCRYG
NLEICINCGINEIKEEVKISEEFIEKFLKRFKDVDKVLSLLRIRNPLDKPELTRYDIITG
SEEDKIENYKIDELDIPEELKEIIKSRGIEELLPVQTLSVKAGLLNGDDLLIISATSSGK
TLIGELAGIKNLIKTGKKFLFLVPLVALANQKYLEFKERYEKLGFKVSLRVGLGRIGKKV
DVETSLDADIIVGTYEGIDYLIRTKRLKDIGTVVIDEIHSLNLEERGARLDGLIGRLRFL
FKEAQKIYLSATIGNPKELAKQLNAKLVLYNGRPVPLERHIIFCKNDFAKLNIIKEIVKR
EWQNISKFGYRGQCLIFTYSRKRAEYLAKALKSKGIKAEFYHGGMEYIKRRKVEDDFANQ
KIQCVVTTAALSAGVDFPASTVILESLAMGADWLNPAEFQQMCGRAGRKGMHEIGKVYLL
VEIGKKYHAKMENTEDEVAFKLLNAVPEDVKVEYNEDEEEEQILATISAGITNRYDIDRV
PYIGRAFSLNKILSNLESYGMIKANNDVKLTNYGSAVAISFLYPKVAEKIKEGIIENKEI
IKLITEIMPFENVYLSNNLKIKLSKILNINVPSRFFDALEVIREGMEKIKDKKLKEDLTL
IIMEFEGVEVEEKILEMIINLRISGKTPGQISKTLYEEFKIQTYSGDIYYYLEQLLNLLD
ATERIARIFNKRYAEKVKELKEKIENPK
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgcttattgttaggaagccaaaaaagaaaaaagatgagatagaaattgttaaagtaggt
ggaaaaatagaagatgggatagaagttaaaaataatcagaagatatttgcaaattacaaa
aaagttggagataaatacaaattatacagatgtagagtaggagataagttaattcagccg
tctaaggttttggagttgttaaaatctgacaaaatatttatattaaaagaaaatgaggaa
gaaatagaagaagttttaaaatcatacaatttaaagtttgattatatagaactctgccca
ttctgtttattaaaaaatatctacaaaagattgacaagaaataatagatgtagatatgga
aatttagaaatatgtataaactgcgggattaatgaaatcaaagaggaagtaaaaattagc
gaagaatttatagagaaatttttaaagagatttaaagatgttgataaagttctatctttg
ttgagaataagaaatccattggataagccggaattaacaagatatgatattataacaggt
agtgaagaagataagattgaaaattataagatagatgagttagatattccagaagaactt
aaagagataataaagagtagggggattgaagagcttttgcctgttcaaacactatccgtt
aaagctggtttgttaaacggagatgatttattaattatttcagcaacttcatctggaaaa
actttaattggtgagttagcaggaattaaaaatttaattaaaactggaaaaaagtttcta
tttttagttcctttagttgccttagcaaatcaaaaatacttagaatttaaagaaagatat
gaaaaattaggttttaaagttagtttaagagttggattaggtaggattggaaagaaagtt
gatgttgagacatcgttagatgctgatattatcgttgggacttacgaaggaattgattat
ttaattagaactaaaagattaaaagatattggaacagtggttattgatgaaatccactct
ttgaatttagaggagagaggagcaagattggatggtttaattggtaggctgaggttttta
tttaaagaggcacaaaaaatatatttatcagcaacaattggaaatccaaaggaattggct
aaacaactaaatgccaaattagttttatataatggaaggccagttcctttagagagacat
ataattttctgcaaaaatgactttgccaaactaaatattatcaaagaaattgttaaaaga
gaatggcagaacatttcaaaatttggatatagagggcagtgcttaatatttacttactca
agaaagagagcagagtatttagctaaagctttaaaatctaaaggaattaaagcagagttc
tatcatggaggtatggaatatataaaaagaaggaaagttgaagatgatttcgcaaatcaa
aaaattcagtgcgttgttacaactgccgctttatctgcaggggttgattttccagcatca
actgttatcttagagagtttagctatgggggctgattggttaaatcctgctgaattccag
caaatgtgtgggagggctggaagaaaggggatgcatgaaattgggaaggtctatcttttg
gtggaaatagggaagaaatatcatgcaaagatggaaaatactgaggatgaagtggcattt
aaattattaaacgcagttcctgaagatgttaaagttgaatataatgaggatgaggaggaa
gagcagatattagctacaatctcagctggaataactaacagatacgatatagatagagtt
ccttatattggaagggcattttctttgaacaaaattttgagtaatttagagagttatgga
atgataaaagctaataatgatgtgaaattaacaaattatggaagtgcagttgctatttca
tttttatatccaaaggttgctgaaaaaattaaagaggggattattgagaataaagagatt
ataaaactaattactgaaattatgccctttgaaaacgtctatttatcaaacaatttaaaa
ataaagctttcaaaaattttgaatataaatgttccttcaaggttttttgatgctttggaa
gttattagggaggggatggaaaaaattaaggataagaagttaaaggaggatttaacttta
attattatggaatttgagggagttgaagttgaagaaaaaattttagagatgattattaat
ctaaggatttctggaaaaactcctggacagatatcaaagacattatatgaagagtttaaa
atacaaacgtactctggagatatttactattacttagagcagttattaaatcttttagac
gctacagagagaatagcgaggatatttaacaagagatatgccgagaaagttaaagaacta
aaagagaaaattgaaaatccaaaatag
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