Maniola jurtina (meadow brown): 123870158
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Entry
123870158 CDS
T09254
Name
(RefSeq) DNA ligase 4-like isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
mju
Maniola jurtina (meadow brown)
Pathway
mju03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mju00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
123870158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mju03400
]
123870158
Enzymes [BR:
mju01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
123870158
DNA repair and recombination proteins [BR:
mju03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
123870158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
DNA_ligase_IV
RNA_ligase
BRCT
RTT107_BRCT_5
LIG3_BRCT
CDPS
Motif
Other DBs
NCBI-GeneID:
123870158
NCBI-ProteinID:
XP_045769305
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Position
2:complement(4225447..4244611)
Genome browser
AA seq
886 aa
AA seq
DB search
MVTIPANEILFGELCNVLEQIHKKKKQRPEQDKILAKFVNNFTMRVANTVGAKDSTFFPI
LRLLLPDCERERSAYNLKETKLGALLVKVLSLNKQTLDAQKLLNFRSVHSSSHESDFASI
AFFVLNTRAQQTTPQLTVGAVNEILDKIAKDEVGNKGPTLDEAFSYAITKLTPQEFKWFL
RMILKDLKLGMSSHRILSCFHPDAPELYRNCSDLRKVCEDLEDGDTRPLELGVQLFFAVR
PMLSERMDVTHIHLSPNKTYLVEDKFDGERFQMHVENNIFEYYSRKGFAYSKKYGKTFES
GILTPDLKTCFSSNAHNFILDGEMMGWHKENQCFGSKGMSYDIKKITEHSSYRACYCVFD
ILYYNGQSLVGPPDKGGLPLHERLKILDTLFTDVPGVIQHSKRETVKDVSDVVNALNKAI
DDQDEGIVLKDVHSYYIPAQRNAGWFKIKPEYTEGTMTDLDLVIIGAEEAENKRQGRAKS
FYVACADIDSGDTPQRWVCVGHVSSGVSYQEKERLCALLEQHWRAARSAPAPPCLLFGKK
KPDFWILPEHSIVLQVRATELVRSAEYGAGYALRFPRVERIRDDKPVADVMTLQHFTQLV
STRSPVVKLSTKRINSETTNEPKERKIQRISKAAQVSDKFRTKLADDVEVTSKALLGRKL
CILSDDEDCKKADLVRIIQSHGGKHVENSGPDTWCCVAGTITVKIRNLIAMRSEDIITTS
WLRSLPASESLCALSPLDMLSIKDETRLNLCMEYDKFGDSYAEEIDENTLRKCFKKMDAE
LPIYLTTREMLKLDRQLFGENNPFSFLRGCSIHVVDNALYATLARVYGAKAADSPQVATH
VVVPNKMKTEDLEALKINSKAKIVTEDWLKQCFEEKARITETEYLL
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggtaaccataccagcaaatgaaatactattcggagaattgtgtaatgtacttgaacaa
atacataaaaaaaagaagcaaaggccagagcaagataaaatattagcgaaattcgtaaat
aattttactatgagagtggctaatactgttggcgcaaaggattccacttttttccctatt
ctaagattactgctacctgattgtgaacgggaaagaagtgcatataacttgaaagaaaca
aaactcggtgctttattggtaaaagtattatcactgaataaacaaacactagatgcccaa
aagttgttgaactttcgctccgtccattcctcttcgcatgaaagtgattttgctagcata
gcatttttcgttttgaataccagagcacaacaaactactccacagttaacagtgggcgct
gttaatgaaattttagacaaaattgctaaggatgaagttggaaataaaggaccgaccctg
gacgaggcatttagctacgcgattacgaagttaacacctcaagagtttaaatggtttctc
cgaatgattttaaaggatttgaagctcggcatgagttcacatcgcatactgtcatgcttt
catccggacgccccggaactgtatcgaaattgtagcgatcttcgtaaggtatgcgaagat
ctggaagatggtgatactcggccgctagagctcggcgtacagctgttctttgcagtgagg
ccgatgctgtccgagcgaatggatgtgacgcacatacatctctctccgaataaaacctac
ctggttgaagataagtttgatggggagaggttccagatgcatgtggaaaacaacattttt
gaatattattcgagaaaaggtttcgcttattcgaagaagtatggtaaaacatttgaatct
ggcatacttaccccagatttgaagacttgcttttcatcgaatgcgcacaattttattctt
gatggtgaaatgatgggctggcataaagaaaaccaatgttttggttctaaaggaatgtcg
tacgatataaagaagataacggaacattcatcatatcgcgcgtgctactgcgtattcgac
atcctctattacaacggacagtcgctggtcgggcctccggacaagggaggcctacctctt
cacgagagactcaagatactggacactctgttcacggacgttcccggagtcatacaacat
agtaaaagggaaacagtcaaagacgtttcggacgtcgtgaatgccctcaacaaggctatc
gacgaccaagatgagggcatcgtgctaaaagacgtccactcctactacattcctgcccag
cgcaacgccggttggttcaagattaaacctgagtacacagagggcactatgacggacttg
gatttagtgattatcggggccgaggaagcggagaacaagagacagggccgcgctaagagc
ttctatgtggcctgtgctgatattgactcaggcgatacaccccagcgctgggtgtgcgtg
ggccacgtctccagcggggtcagctaccaggagaaggagcgcctgtgtgcgctgctggag
cagcactggcgcgctgcgaggagcgcgccggcgccgccctgtctgctcttcggcaagaag
aaaccagacttctggatactcccggagcattccattgttttacaggtgcgcgccacggag
ctagtccgcagcgcggagtacggcgccggctacgcgctgcgcttcccgcgcgtcgagcgc
atacgcgacgacaagcccgtcgccgacgtcatgacgctgcagcacttcacccagctcgtc
tctacaagaagcccagtcgttaaactgagcacaaagcgcatcaatagcgagactacaaac
gagccaaaggagaggaaaatacaaagaatatcaaaagcggcgcaagtgtcggataaattc
cgcactaaactagcagacgacgtggaggtgacgtctaaagcgcttctggggcgaaagctg
tgcatactgtctgatgatgaggactgcaagaaagcggatctggtgcggatcattcagtca
cacggggggaaacatgttgagaatagtggacctgatacatggtgctgtgtggccggtact
atcacagtcaaaatacgcaacctgatagcgatgcgaagtgaagacatcatcactacatct
tggcttcgctctctgcccgcttcagagagtttgtgtgctctgagtcctttagatatgctg
tctataaaggatgagactagactgaacttatgtatggaatatgacaaatttggagatagc
tacgcggaggaaatagacgaaaacacgttaagaaaatgtttcaaaaaaatggatgcggaa
ctgccaatatatttgacgacaagagaaatgttaaaactagacaggcagttgttcggtgaa
aataacccgttctctttcttacgaggttgttccatacacgtagtggacaatgccttgtat
gcaactttagcacgagtgtatggcgccaaagctgcggactcaccccaagtggccacgcat
gtggtcgtcccaaataaaatgaagacagaagatttagaggctttaaaaattaattccaaa
gcgaaaattgtgacggaagactggttaaaacagtgtttcgaagaaaaagcaaggattacg
gaaacggagtatttactgtaa
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