Maniola jurtina (meadow brown): 123875919
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Entry
123875919 CDS
T09254
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
mju
Maniola jurtina (meadow brown)
Pathway
mju03022
Basal transcription factors
mju03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mju00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123875919
09124 Replication and repair
03420 Nucleotide excision repair
123875919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mju03021
]
123875919
03400 DNA repair and recombination proteins [BR:
mju03400
]
123875919
Transcription machinery [BR:
mju03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
123875919
DNA repair and recombination proteins [BR:
mju03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
123875919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
123875919
NCBI-ProteinID:
XP_045777972
EnsemblRapid:
ENSMJUG00000007010
LinkDB
All DBs
Position
20:577847..583963
Genome browser
AA seq
476 aa
AA seq
DB search
MSESSKSSKSSNLNPSPTLQCKDLHEYLKSRSAQFLETLYNYPTICLAVYRELPELARHF
VIRLLFVEQPVPQAVVASWVSQTHAKEQSKACEALSELFVWQEAPIPGGLPGWMLSQSFK
KNLKVALLGGGRPWSMSSSLEPDGKARDVAFLDAYALERWECVLHYMVGSAQTEGISADA
VRILLHAGLMTRDAEDGSAVITRAGFQFLLLSTAKQVWLFLQHYLHTAEKRSLSAAECLA
FLYQLSFSTLGKDYSTEGMSNNMLVFLQHLREFGLVYQRKRKAGRFYPTRLALNITCVKD
GIAPLDTTTTSGYIIVETNYRVYAYTQSSLQVALLGLFTELIYRFPNVVVGVLTRESVRA
ALRGGISAQQIIRYLEQHSHPQMLKSDTAGVRTASVLPPTVVDQIQLWESERNRFTYTEG
VVYNQFLSQAEFAVLRDYAKGAGVLTWHSERARTMVVTRASHDDVKRFWKRYSKAS
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtcgtctaaatcttcaaagtcttcgaacttaaacccttcgccgactcttcag
tgcaaagatctccacgaatatttaaaaagtcgctcggctcagtttttggaaactctgtac
aattatcctactatatgccttgcagtttaccgggagcttccagagttagcacgacacttt
gtaataaggcttctgtttgtggagcagccggtgccacaagctgtagtggcttcgtgggtc
tcacagacacatgctaaggaacaaagcaaggcatgtgaagcattatcagagttgtttgtg
tggcaggaggcacccatacccgggggactgcccggatggatgctctcacagtccttcaag
aagaatctcaaggtggctttgctgggaggaggtcgtccatggagcatgtcatcctctcta
gagccagatggcaaagcgcgagacgtagcgttcctggacgcatatgcgctggagagatgg
gagtgtgtgctgcactatatggtggggtccgcacagactgagggcatcagtgctgatgct
gtgaggattctgctgcatgctgggcttatgaccagagatgcagaagatggctcagcagta
ataactagggctggtttccagtttttactgctcagtactgctaaacaggtgtggctgttc
cttcaacattacttgcacactgcagagaaaagaagtctgagcgcagctgagtgtctagca
tttctataccagctcagcttcagtactttaggaaaggattacagcacagaaggcatgagc
aacaatatgttggtgtttttgcaacatttgagggagtttggtcttgtttaccagagaaag
cgcaaagcgggccgcttttaccccacgcgactcgccctcaacattacctgcgtgaaggac
ggcatcgcgccgctggacaccaccaccactagtgggtacatcatcgtagaaaccaattat
cgagtatacgcgtacacacagagcagtttacaggtggccttattgggactcttcaccgaa
ctgatatacaggttcccaaacgtggtagtgggggtgttgactcgggagtcggtgcgcgcg
gcgctgcggggaggcatctcggcgcagcagatcatacggtacctcgagcagcactcgcat
ccgcagatgctgaaatcagacacggccggcgtcaggacagcctcagtgcttccgcccaca
gtcgtagaccagatccagctgtgggagagcgagcgaaaccggttcacttacactgagggg
gttgtgtacaaccagttcctgtcgcaggcggagttcgcagtgctgcgcgactacgcgaag
ggcgcgggcgtgctgacgtggcacagcgagcgggcgcggaccatggtggtgacgcgcgcc
tcgcacgacgacgtcaagcggttctggaagcgatactccaaggcttcctaa
DBGET
integrated database retrieval system
