Manis javanica (Malayan pangolin): 108392994
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Entry
108392994 CDS
T06054
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
mjv
Manis javanica (Malayan pangolin)
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mjv03036
]
108392994 (CHD6)
Chromosome and associated proteins [BR:
mjv03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108392994 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
108392994
NCBI-ProteinID:
XP_036868586
LinkDB
All DBs
Position
Unknown
AA seq
2897 aa
AA seq
DB search
MSDASIGFDYKSPSPFDRSTDQEEKIDDVASHCLPQKDLFAAEEEAETLFPRKMTSHSGL
EDSGGGGTGVKKKRKKKDLGEQEGAAKGSKDREPKPKRKREPREPKEPRKAKEPRKAKEP
KEPKQRDGAKKVRKPREASGTKEAKERRSGVDSAARTKSRKASKEQGPTPVEKKKKGKRK
SEATVESSELDQGGLNPSLRSPEESTESADSQKRRSGRQVKRRKYNEDLDFKVVDDDGET
IAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASKTVQEVHPGEPPFDLELFYVKY
RNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEVDRILE
VAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAKVKEFESLQVLPEIKHMERPA
SDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSE
IFLRGLHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGSQISRQMIQQYEMVYRDAQGN
PLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMVLEHK
VLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRR
LKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLTKGANQHNMPNLINTMMELR
KCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKV
LIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAG
GLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKAS
LKLGLDKAVLQDINRKGGTNGVQQLSKMEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQI
LQRRTHTITIQCEGQGSTFAKASFVASGNRTDISLDDPNFWQKWAKIAELDTEAKNEKES
LVLDRPRVRKQTKHYNSFEEDELMEFSELDSDSDDRPTRSRRLNDKTRRYLRAECFRVEK
NLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCVKHYKGDEKIKSFIWELITPT
KDGQAQTLQNHSGLSAPVPRGRKGKKTKNQLLLPELKNADWLATCNPEVVLHDDGYKKHL
KQHCNKVLLRVRMLYYLKAEILGEAADKAFEGTPSRELEVPLPDIDYVEIPVEWWDAEAD
KSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKSLSAEQGVADGTSDIPERSNVEKE
DNTEDKLDGLQKQTESSGDGGDGIFGEKKDDSRAAQDGSDPDRAPWPVPSALTARLRRLV
TIYQRCNRKELCRPEVLGPGNQGYWVQEEMFRRTSEMELINKEAQKRWTRREQADFYRTV
SSFGVVYDEEKKTFDWTQFRLISRLDKKSDESLGHYFHSFVAMCRNVCRLPTWKDGGEKT
LSVTGDTSVHVYCPAGTIGGFVLRCTSADGVASFIPRKVLVMEVMAFLAKRKMTAGQDGS
DPDRAPWPVPSALTARLRRLVTIYQRCNRKELCRPEVLGPGNQGYWVQEEMFRRTSEMEL
INKEAQKRWTRREQADFYRTVSSFGVVYDEEKKTFDWTQFRLISRLDKKSDESLGHYFHS
FVAMCRNVCRLPTWKDGGPPDPTIYVEPITEERAARTLYRIELLRKVREQVLKCPQLHER
LQLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMTDPQLSFLDAYRNYAQHKRA
DTQAPESLCCLYQTNSKLYESLRYTQMRRTSESLENESENLVKPEGRDDHLSPPGGSLSG
VTCENFIAKVQDVISITHDRSLVPESLESIMCGRKVPNREPDPFQQSPTTNTEPRRDAGA
HLASRDRGCQPGGLEAEIASDPSFMRSLEAGVAQMNIRNGKHLLMSLSKEGELCRSETGQ
MPESIGQLEAKCLASPSLDPGNESGFVDMCNLSICDSKRNLSSDQQLIDLLENNSFESKL
ILSQNHSDEEEEEEENEEENLDLAAGMRDRPGVLHLTEPTANIPREKSRGSRLGAAEKGS
LGAASQNPGLQGAFPEAACQCHCKHMGRWMHSLENDELEVERPKGGYPDLYESRTNNITV
EAEPTALPPEPFQVKHELLQETWKESAEGKKGFPTYPEGSEPKSEDTDFESKDDYDRDGN
CRSQDYPGKYSEEESKSSTSGIAGDIGDDLQETRAPTIAQLLQEKTLYSFSEWPKDRVII
NRLDSICHVVLKGKWPSGQQYETSGPLPTPVLTSRAGPRSSLAEPEAAEHSFSNGAALVA
QIQKESFLAPVFTKDDQKHRRPFEFEVERDTKARSLEQFSATHGHPPVVLNGWHGESAID
LSCTSEGSPGATPPFPVSASTPKIGAIGSLQGALGMDLSGILQAGLIHPVTGQIVNGSLR
RDDTATRRRRGRRKHVEGGMDLIFLKEQTLQAGILEVHEDPGQAPLSTPHPEGPVPASSA
PEPTPAVSGQAEKAISSKSLLDWLRQQADCSLDVPGFGANFSDKPKQRRPRCKEPGKLDI
NSLSGEERVPAVTKDPGLRGFLPENKFNHTLTEPVLRDAGPRRRGRRPRSELLKTPAIVA
DSPSGMGPLFMNGLVAGMDLVGLQNMRNVPGIPLTGLVGFPAGFATMPTGEEVKSTLSML
PMLLPGMAAVPQMFGVGGLLSAPMATGCTSTAPSPLSSTTKSGASATEKAAEDKSSSHDV
NTDTLTQDRPGPGPFSDRSEPAVTTSSPVAFNPFLIPGVSPGLIYPSMFLSPGMGMALPA
VQQARHSEVIGLESQKRKKKKTKGDNPNPAPEPAPAAGRRPGSEQGHPESRAPGPPDREH
AAQAREGGLKDSTSDTN
NT seq
8694 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgcctctatcggttttgactacaaatccccctccccgtttgaccgcagcacc
gatcaggaagagaaaatcgatgatgttgccagtcactgtctgccccagaaggacctgttt
gctgctgaagaggaagcagagaccctttttcctcggaaaatgacatcccatagtgggctg
gaggacagcggaggaggtggcactggagtgaagaagaaacggaagaaaaaggatctggga
gagcaagagggggcagcaaagggaagcaaggacagggagcccaagccaaagaggaagcgt
gaacctagagagccaaaggagcccaggaaggccaaggagcccaggaaggccaaggagccc
aaggagcccaagcagagggatggagcaaagaaagtgcggaagccccgggaggcctcgggc
accaaggaggccaaagagaggaggagtggggttgactctgcagccaggacgaaatccagg
aaggccagcaaggagcaaggaccaaccccagtggagaaaaagaagaaaggaaagaggaaa
agtgaagccacagtggagagttcagagctggatcagggcgggctgaacccttccctgcgg
agccctgaggaatccactgagtctgcagacagccagaaacgacgctcaggacgacaagtg
aaacgcaggaaatacaacgaggacctggacttcaaagtggtggatgacgatggggaaaca
atcgctgttcttggagccggccggacatctgccctctcggcctctaccctggcttggcag
gcagaggagcctccagaagatgatgctaacatcatcgagaagatcctggcatccaagact
gtccaagaggttcacccaggagagcccccattcgacttggagctattctacgttaagtat
agaaatttttcctacttacactgtaaatgggccacaatggaagagcttgaaaaggatcct
cgcattgcacagaagatcaagcgatttaggaataaacaagcccaaatgaagcacattttt
actgagcctgatgaagacttgttcaacccagactatgtagaagtcgatcgcatcttggag
gtggcccacaccaaggatgcagaaactggagaggaagtgacgcattacctggtgaagtgg
tgctcactgccttacgaagagagcacgtgggagcttgaggaagatgtggatcctgcaaaa
gtaaaagaatttgaatctctccaagttctccctgaaattaagcacatggagcggcctgcc
tcagactcttggcagaaactcgagaagtctcgagagtacaagaacagtaatcagctccgg
gagtaccagctggagggaatgaactggcttctttttaactggtataacagaaaaaactgt
attctggctgatgagatgggcctggggaaaaccatccagtccatcacattcctttcagaa
atcttcctcaggggactccacggccctttcctcatcatcgccccgctgtccaccatcact
aactgggagcgggagttccggacttggacagagatgaacgccattgtctaccacggcagc
cagatcagcaggcagatgatccagcagtatgaaatggtgtacagagatgcacagggaaat
cccctttcaggagtcttcaagttccacgtggtcatcaccacatttgagatgatcctggca
gactgcccagagctgaagaagattcactggagctgtgtgatcatcgatgaagcccacaga
ttgaagaataggaactgcaaacttctggagggactaaagctcatggtcctggaacacaaa
gtacttctcacaggcacgcccttgcagaactctgtggaggagctcttcagtttgctgaat
ttcctggagccatcacagtttccttcagagactgctttcttagaggaatttggagatctg
aaaacagaggaacaggtaaagaaactgcagtctatcctaaaaccaatgatgcttcggcgg
ctgaaagatgatgtggagaaaaaccttgctcccaaacaagagacgatcattgaagtagag
ttgaccaatatccagaaaaagtactaccgtgccatcttagagaagaacttttccttcttg
accaagggcgcaaaccagcacaacatgccgaatctcatcaacactatgatggagctgaga
aagtgctgtaaccatccttacctgatcaacggggcagaggagaaaattctggaggatttt
cgaaaaactcacagccctgatgcccctgactttcagctgcaggccatgattcaggcagca
gggaagctggtgctgattgataaactgctccctaagctgattgcaggtggccacaaagta
ctcatcttctcccagatggtgcgctgtctggatatcctggaagattacctcatccaaaga
agatacacctatgagcgaattgatgggcgagtacggggaaacctgcgccaggcagccatc
gaccggttctgtaagccagactcagaccgctttgtctttcttctgtgcaccagagcggga
ggcctggggatcaatctcacagctgccgatacctgcatcatatttgattcagactggaac
ccacaaaatgacttgcaggctcaggcccgatgccaccggataggccagagtaaagccgtg
aaggtgtatcgcctcattactcggaactcctacgagcgggagatgtttgacaaggccagc
ctgaaactgggtctagacaaggctgttcttcaggacatcaaccgaaagggcggcaccaat
ggagtacaacagctttcaaaaatggaggtagaagacctgctccggaaaggtgcttatgga
gccttaatggacgaggaagacgagggctccaagttctgtgaagaagacatagatcagatt
cttcagaggagaacgcacaccattaccatccagtgtgaagggcaaggatccacctttgcc
aaggctagctttgtggcttcaggaaacagaacagatatttccttagatgacccaaacttc
tggcagaagtgggctaaaatagctgaactggatactgaagcaaagaatgaaaaggaaagc
ttagtgctcgaccggcctcgtgtgagaaagcagaccaaacactacaactcctttgaggag
gatgagctcatggagttctccgagctagacagcgactctgacgacaggcccacgaggtcc
aggcgcctcaatgacaaaaccagacgctacctccgagctgaatgcttccgggtagagaag
aacctgctcatctttggctggggccggtggaaagacatcctgactcatgggcgattcaag
tggcatctgaatgagaaggacatggagatgatttgccgtgccctgctggtgtactgtgtc
aagcattacaagggggatgagaagatcaagagtttcatttgggaactgatcacacctacc
aaagatgggcaggcccagaccctccagaaccactcagggttgtctgctccagttcccaga
gggagaaaggggaagaagacgaagaaccagctgctgctcccagagttaaagaatgcagac
tggctggccacctgcaaccctgaggtggtcttgcatgacgacggctacaagaagcacctc
aaacagcactgtaacaaggtacttctgcgcgtccggatgctgtactacctaaaagctgaa
atactgggagaagcagctgacaaagcatttgaaggaactccctccagggagctggaagtg
cctctgcctgacatcgactacgtggaaatcccagtggagtggtgggatgctgaggctgat
aagtcccttctgattggtgtgttcaaacacgggtatgagaggtacaatgccatgcgagca
gaccccgcactttgcttcctggagaaagttgggatgccagatgagaagtccctttctgca
gaacagggtgttgcagatgggacctcagacatacccgaaagaagtaacgtggagaaagaa
gataatactgaagacaaattagatggccttcagaaacaaacggaaagttctggtgatgga
ggtgatggcatttttggcgaaaagaaagatgacagccgggcagcccaggatggctccgac
ccagacagagcgccctggccagttccgtctgctctcacagctcggcttagacgactggtc
accatttaccagcgttgcaaccgcaaggaactctgccggcctgaagttctggggccaggt
aaccaaggatactgggtccaggaagagatgttcaggaggacctcagaaatggagctcatc
aacaaggaagctcaaaagaggtggactaggagagaacaagccgacttctacagaactgtg
tcttcctttggtgttgtttatgatgaagaaaagaaaactttcgactggacgcagttccgc
ctcatctcccgtttggacaagaagtcggatgagagccttgggcactacttccacagtttt
gtggccatgtgccggaacgtctgtcgtctgcccacgtggaaagatggtggtgagaaaact
ctgtcagtaacaggagatacctctgtgcatgtttactgccctgcagggactatcgggggg
tttgttctgagatgcacttctgctgatggcgtggcttcatttatccctaggaaagttctg
gtgatggaggtgatggcatttttggcgaaaagaaagatgacagccgggcaggatggctcc
gacccagacagagcgccctggccagttccgtctgctctcacagctcggcttagacgactg
gtcaccatttaccagcgttgcaaccgcaaggaactctgccggcctgaagttctggggcca
ggtaaccaaggatactgggtccaggaagagatgttcaggaggacctcagaaatggagctc
atcaacaaggaagctcaaaagaggtggactaggagagaacaagccgacttctacagaact
gtgtcttcctttggtgttgtttatgatgaagaaaagaaaactttcgactggacgcagttc
cgcctcatctcccgtttggacaagaagtcggatgagagccttgggcactacttccacagt
tttgtggccatgtgccggaacgtctgtcgtctgcccacgtggaaagatggtggtccgcca
gatcccaccatctatgttgaacccatcactgaggaacgggctgcaagaactctgtaccgc
attgaactgttaaggaaggtccgagagcaggtgcttaagtgtcctcagctgcatgaacgc
ctgcagctctgcaggcccagcctctacctcccggtctggtgggagtgtggaaagcatgat
cgagacctgctcatcggcaccgccaagcatgggctgaaccgcaccgattactacatcatg
accgatccccagctgtccttcttggatgcctatagaaactatgcccagcataaaagagct
gacacccaggcaccagaaagtctctgttgcctttaccagaccaactccaaactgtatgaa
tcgcttagatatactcagatgaggagaacttcagagtcccttgaaaacgaatccgagaat
ctagtgaaaccagaaggtagagatgatcatctcagccctcctgggggcagcttatctggt
gtgacttgtgaaaacttcattgctaaagttcaggatgtcatttccatcactcacgacaga
agtctggtgcctgagtctttggagagcataatgtgtggcaggaaggtacccaaccgagag
ccagacccttttcagcagagcccaactaccaacacagaacccaggagagatgctggtgcc
cacttagcaagcagagataggggctgccagcctggaggcctggaggcagaaatagcttca
gacccctctttcatgcgtagtttagaagcaggcgtagctcaaatgaacattagaaatgga
aaacatctgctgatgtctctctcaaaggaaggggagctctgccgcagtgagacggggcag
atgcctgaaagcatcgggcagctagaagccaaatgcttagcctccccttccttggatcca
ggaaacgaaagtggatttgtagatatgtgcaatcttagtatctgtgactctaaaagaaac
ctgtcatcagatcagcaattaatcgatttattagaaaacaatagttttgaaagtaaattg
attctgagtcagaaccacagtgatgaagaggaggaagaggaggaaaatgaggaggaaaac
ttagacttggcggcaggcatgagggacaggccaggggttttgcatctaaccgagcccact
gctaatatcccaagggagaagagccgaggctcccgactaggtgcagctgagaaaggaagc
ctgggggctgcgagccagaaccctgggctgcagggggcttttcctgaagcagcctgtcag
tgtcactgcaaacacatggggaggtggatgcacagccttgaaaatgacgaactcgaagtg
gagagacccaagggtggttacccagacctgtatgaaagcagaactaataatatcacagtg
gaggccgagcccactgctcttccaccagagccatttcaagtgaagcatgaacttctgcaa
gaaacttggaaagaaagtgcagaggggaaaaaaggtttccccacctatcccgaaggaagt
gagcccaagtcagaagacacggattttgagagtaaagatgattatgatagagacggaaac
tgccgtagtcaagattatccagggaaatactccgaagaggagagcaagagctcgacctcg
ggcattgcaggggacataggggacgatctccaggagacgcgggctcccaccattgctcag
ctgctccaggagaaaaccctctattccttctccgagtggccaaaggatcgagtgataatc
aaccgcctagatagtatctgccacgtagtgttaaaggggaagtggccctccggccagcag
tatgagacctcgggcccactgcccacccccgtgttaaccagcagggccggtcctcgaagc
agcctcgcggagccggaagcagcagaacacagcttcagcaacggtgcagcactggtggcc
cagatccagaaggagagcttcctggctccagtattcacaaaggatgatcaaaagcacaga
cgtcctttcgagtttgaagtggagagggatacaaaggctcggagcctggaacagttctct
gccacccatgggcatccccccgttgtcctcaatggctggcatggggagtcagccatagac
ctctcctgcacatcagaggggtccccaggagctacaccccccttcccagtgagtgccagc
acccctaagattggggctatcggttcacttcaaggagcccttggcatggacttgtctggg
attctacaagctggcctgatccatccagtgacgggacagatcgtcaatgggagccttaga
agagatgacactgccacaaggaggcggagagggaggcggaaacatgtggaaggcgggatg
gacctcatctttttgaaggagcaaacacttcaggcaggaatcttggaagttcatgaagac
ccagggcaggctcccctgagcaccccacaccctgaagggccagtgcctgcctcttctgcc
cccgaaccgaccccagcagtcagcggccaggctgagaaagccatttccagcaagagtctg
cttgactggctgcggcagcaagctgactgctccttagatgttcctggctttggagcaaat
ttttcagacaaacccaagcagaggaggccacgctgtaaggaacctggaaagttagacatc
aactccctgagtggggaagagagggttcctgcagtaaccaaggatcccggactgaggggg
ttcctcccagaaaacaagttcaatcacaccctgactgaacctgtccttcgagatgcaggc
ccccgcaggagggggaggcggcctcggagcgagctcctgaagactcccgccatcgtggcg
gactctccctcgggaatggggccactgttcatgaacggactggttgctgggatggacctg
gtaggacttcagaacatgagaaatgtgccgggcatccccctcacaggcctggtggggttc
ccggccggctttgccacgatgcccacgggcgaggaggtgaaaagcaccttgagcatgctg
cccatgctcctgccagggatggccgccgtgccccagatgtttggtgttggggggctgctt
agtgctcccatggccactggctgcacttcgactgccccatcgcctctgtcaagcacaaca
aaaagcggtgcgtcagcgaccgaaaaggctgcagaagacaagtcaagtagccatgatgtg
aacacggacacattaacccaagacaggcctggtccgggtccgttttcggaccggtctgaa
cctgcagtaactacgagtagtcctgtggcttttaacccctttctcatcccaggagtgtct
cctggactcatttacccgtccatgtttctctcccctggcatgggcatggctctgccagct
gtgcagcaggccagacactctgaagtcataggtctagagagccagaagaggaagaagaag
aaaacgaaaggggacaatccaaaccccgcccccgagcctgctcccgcggccggaaggagg
ccaggcagtgagcagggccaccctgaatccagggcgcctgggcccccagacagagaacat
gctgcccaggccagggaagggggcctcaaagactctaccagtgacaccaattag
DBGET
integrated database retrieval system
