Manis javanica (Malayan pangolin): 108393414
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Entry
108393414 CDS
T06054
Symbol
USP47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
mjv
Manis javanica (Malayan pangolin)
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mjv01002
]
108393414 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mjv04121
]
108393414 (USP47)
Enzymes [BR:
mjv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108393414 (USP47)
Peptidases and inhibitors [BR:
mjv01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108393414 (USP47)
Ubiquitin system [BR:
mjv04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108393414 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
ubiquitin
Motif
Other DBs
NCBI-GeneID:
108393414
NCBI-ProteinID:
XP_036882269
LinkDB
All DBs
Position
Unknown
AA seq
1374 aa
AA seq
DB search
MVPGEENQLVPKEDVFWRCRQNIFDEMKKKFLQIDNAAEEPRVLCIIQDTTNSKTVNERM
TLNLPASTPLRKLFEDVANKVGYINGTFDLVLGNGISTADMVPLDHTSDKSLLDANFEPG
KKNFLHLTDKDGEQPQILLEDSSAGDDSVHDRFIGPLPREGSVGSTSDYVSQSYSYSSIL
NKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLF
VLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINEL
YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPN
QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSTF
IDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLESNSGTEKISKSGL
EKNSLIYELFSVMVHSGSAAGGHYYACIKSFSDELWYSFNDQHVSRITQEDIKKTHGGSS
GSRGYYSSAFASSTNAYMLIYRLKDSARNAKFLEVDEYPEHIKNLVHRERELEEQEKRQR
EIERNTCKIKLFCLHPVKQVMMENKLEVHKDKTLKEAVEMAYKMMDLEEVIPMDCCRLVK
YDEFHDYLERSYEGEEDTPMGLLLGGVKSTYMFDLLLETRKPDQVFQSYKPGEVMVKVHV
VDLKTESVASPITVRAYLNQTVTEFKQLISKAIHLPAETMRIVLERCYNDLRLLTVPSKT
LKTEGFFRSNKVFVESSETLDYQLAFTDSHLWKLLDRHANTIRLFVLLPEQSPGSYSKRT
TYQKADGDSGNVDNDCERVKGPVGSLKSVEAILEESTEKLKSLSLQQQQDGDNGDSSKST
ETSDFENIESPLNERDSSSVDNRELEQHIQTSDPENFQCEERSDSDVNNDRSTSSVDSDI
LSSSHSSDTLCNADNAQVHLPNGLDSHSITSSRRTKANEGKKETWDTAEEDSGTDSEYDE
SGKSRGEIQYMYFKAEPYAADEGSGEGHKWLMVHVDKRITLAAFKQHLEPFVGVLSSHFK
VFRVYASNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEQEPCKFL
LDAVFAKGMTVRQSKEELIPQLREQCGLELSIDRFRLRKKTWKNPGTVFLDYHIYEEDIN
ISSNWEVFLEVLDGVEKMKSMSQLAVLSRRWRPSEMKLDPFQEVVLESSSVDELREKLCE
ISGVPLEDIEFAKGRGTFPCDISVLDIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRDKT
EELMELTDEQRNELMKKESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKDLTQD
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccggcgaggagaaccaactggtcccgaaagaggatgtgttttggagatgcaga
caaaatatctttgatgaaatgaagaagaaatttttacagatagacaatgctgctgaagaa
cctagagtcttatgtataatacaagatactactaattcaaagacagtaaatgaacggatg
actttaaacttaccggcttctactcctctcagaaagctctttgaagatgtggccaacaaa
gtaggctacataaatggaacctttgatttggtgttgggaaatggaatcagtactgctgat
atggttccattggatcataccagtgacaagtctcttcttgatgctaattttgagccagga
aagaagaactttctgcatttgacagataaagatggtgaacagcctcagatactactggag
gattccagtgctggggatgacagtgtccatgacagatttataggtccacttccaagagaa
ggttctgtgggctctaccagtgattatgtcagccaaagctactcttactcatctattttg
aataaatcagaaactggatatgtgggattagtaaaccaagcaatgacttgctacttgaat
agccttttgcaaacactttttatgactcccgaatttaggaatgcattatataagtgggaa
tttgaagaatctgaagaagatccagtgacaagtatcccataccaacttcaaaggcttttt
gttttgttacaaaccagcaaaaaaagagcaattgaaaccacagatgttacacggagcttt
ggatgggatagtagtgaggcttggcagcagcatgatgtacaagaactatgcagagtcatg
tttgatgctttggaacagaaatggaaacaaacagaacaggctgatcttataaatgaacta
tatcaaggcaagctgaaggactacgtgagatgtctggaatgtggctatgagggctggaga
atcgacacatatcttgatattccattggtcatccgaccttatgggtccagccaagcattt
gctagtgtggaagaagcattacatgcatttattcagccagagatcctggatggcccaaat
cagtatttttgtgaacgttgtaaaaagaagtgtgatgcacgaaagggtcttcggtttttg
catttcccttatctgctgaccttacaattaaaaagattcgattttgattatacaaccatg
caccggattaaattgaatgatcggatgacatttcctgaggagctagatatgagtacattt
attgatgttgaagatgagaaatctcctcagactgaaagttgcactgacagtggagcagaa
aatgaaggcagttgtcacagtgatcaaatgagcaatgatttctccaatgatgatggtgtt
gatgaagggatctgccttgaaagtaacagtggaactgagaagatttcaaaatctggactt
gaaaagaattccttgatctatgagctcttctccgtcatggttcattcagggagtgctgct
ggtggtcattattatgcttgcataaagtcattcagtgatgaactatggtatagcttcaat
gatcaacatgtcagcaggataacacaagaggacattaagaaaacacatggtgggtcttca
ggaagcagaggatattactccagtgcttttgcaagctctacaaatgcatatatgctgata
tatagactgaaggattcagcaagaaatgcaaaatttctagaagtagatgaatatccagaa
catattaaaaacttggtgcacagagagagagaattggaagaacaagaaaagaggcaacga
gaaattgagcgtaatacatgcaagataaaattattctgtttacatcctgtgaaacaagta
atgatggaaaataaattggaggttcataaggataagacattaaaggaagcagtagaaatg
gcttataagatgatggatttagaagaagtaatacccatggattgctgtcgccttgttaaa
tatgatgagtttcatgattatcttgaacgatcatatgaaggagaagaagatacgccaatg
ggacttttactaggtggagtcaagtcaacatacatgtttgatctgctgttggagacaaga
aaacctgatcaagttttccagtcttataaacctggagaagtgatggtgaaagttcatgtt
gttgatctaaagacagaatctgtagcttctcctatcactgtccgtgcttacttaaatcaa
acagttacagaattcaaacaacttatttcaaaggccatccacttacctgctgaaacaatg
agaattgtgctggaacgctgctacaatgatttgcgtcttctcactgtgcccagtaaaacc
ctaaaaactgaaggtttttttagaagtaataaggtatttgttgaaagttctgagactttg
gattaccagctggcctttacagactctcatttatggaaactcctggatcggcatgcaaac
acgatcagattgtttgttttgttacctgaacaatccccaggatcttactccaaaaggaca
acataccagaaagctgatggcgattctggcaatgtggacaatgactgtgagagggttaaa
ggacctgtggggagcctgaagtctgtggaagctattctggaagaaagcactgaaaaactc
aaaagcttgtcgctgcagcagcaacaggatggagataacggggatagcagcaaaagtact
gagacaagtgactttgaaaacattgaatcacctctgaatgagagagactcttcatcagtg
gataatagagaacttgagcagcatattcagacttctgatcctgaaaattttcaatgtgaa
gaacgatcagactcagatgtgaataatgacaggagcacaagttcagtggacagcgatatt
ctgagctccagccacagcagtgacactttgtgcaatgcagataatgcccaagtccatctg
cctaatgggcttgactctcatagcatcacaagtagtagaagaactaaagcaaatgaaggg
aaaaaagagacttgggatacagcagaagaagactctggaactgatagtgaatatgatgag
agtggcaagagcaggggagaaatacagtacatgtatttcaaagcagaaccttatgctgca
gatgaaggttcaggggaaggacacaaatggttgatggtgcatgttgataaaagaattact
ctggctgctttcaaacaacatttagagccctttgttggagttttgtcctctcacttcaaa
gtctttcgagtgtatgccagcaatcaagagtttgagagcgtccgactgaatgagacactt
tcatcattttctgatgacaataagattacaattagactggggagagcacttaaaaaagga
gaatacagagttaaagtgtaccagcttctagtcaatgaacaagagccatgcaagttcctg
ctagatgctgtgtttgctaaaggaatgactgtacggcaatcaaaggaggaattaattcct
caactcagggagcagtgtggtttagagctcagtattgacaggtttcgtctaaggaaaaaa
acatggaagaatcctggcactgtctttctggattatcatatttatgaagaagatattaat
atatccagcaattgggaggttttccttgaagttcttgatggggtggagaagatgaaatcc
atgtcacagcttgcagttttgtcaagacggtggaggccttcagagatgaagttggatccc
ttccaggaggttgtgctggagagcagtagtgttgatgagttgcgagagaagctttgtgaa
atcagtggggttcctttggaagacattgaatttgccaagggtagaggaacttttccctgt
gatatttctgtccttgatattcatcaggatttggactggaatcctaaagtttctaccctg
aatgtctggcctctttatatctgtgatgatggtgcagtcatattttatagggataaaaca
gaagaattaatggagttgacagatgagcaaagaaatgaactcatgaaaaaagaaagcagt
cgactccagaagacaggacatcgtgtgacttactcacctcggaaagagaaagcactaaaa
atatatctggatggagcaccaaataaagatctgactcaagactga
DBGET
integrated database retrieval system