Manis javanica (Malayan pangolin): 108403940
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Entry
108403940 CDS
T06054
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03013
Nucleocytoplasmic transport
mjv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108403940 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
108403940 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mjv03019
]
108403940 (THOC1)
03041 Spliceosome [BR:
mjv03041
]
108403940 (THOC1)
Messenger RNA biogenesis [BR:
mjv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
108403940 (THOC1)
Spliceosome [BR:
mjv03041
]
Complex C
Other components
EJC/TREX
108403940 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
108403940 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
108403940
NCBI-ProteinID:
XP_036873918
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLCTFSQLPGSENEKKCTLDQVFRGVVE
EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENITVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKVSWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGEKFAKMVEHILNTEENWNSWKNEGCPSFVKERTSDTKPTRLVRKRPAPE
DFLGKGPNKKILMGNEELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMV
ENEYKVVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFASKLGEQWKILAPYLEMKDSEIR
QIECDSEDMKMRAKQLLIAWQDQEGVHATPDTLITALNKSGLGDLAESLTNDSETNS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgacgccgccgctcttcagtttgcccgaagcgcggacgcggtttacgaagtct
accagagaggccttgaacaacaaaaatatcaagccattgttgtgtaccttcagccagtta
cctggcagtgaaaatgaaaaaaagtgtacccttgatcaagttttcagaggtgttgtagaa
gaagaaattattaatcattcatcatgtgaaaacgttttggctattatttctcttgctatt
gggggagtaactgaaggtatttgtactgcgtctacaccttttgtgttgttgggagatgtt
ttggactgtcttcctttggatcagtgtgacacaatattcacttttgtggaaaaaaatgtt
gcaacttggaaatctaatacattctattctgctgggaaaaattatttactacgaatgtgc
aatgatctcctaagaagactgtcgaaatcccagaatacagtcttctgtggacgaattcaa
ctctttttggccaggcttttcccgttatctgaaaagtcaggtcttaacttgcagagtcaa
tttaatctggaaaatatcactgttttcaataccaatgagcaagaaagcaccttgggtcaa
aagcacactgaagatagagaagaaggaatggacgtagaagaaggtgaaatgggagatgat
gaagctccaacaacttgctccattccaattgattacaacttatatcgaaaattctggtca
cttcaggattacttcaggaatcctgtgcaatgctatgagaaggtttcatggaaaacattt
ctgaagtattctgaagaagttctagctgtttttaaaagttataaattagatgatactcag
gcctcaaggaaaaagatggaagaattaaaaacaggaggagagcatgtatattttgcaaag
tttttaacaagtgaaaagttgatggatttacaattgagcgacagtaactttcgtcgacac
atcctgttgcagtatctcattttattccagtatctcaagggacaggtcaaattcaaaagt
tcaaactatgttttaactgatgagcaatcactctggattgaagatactacaaaatcagtt
tatcaactactatctgaaaacccccctgatggagaaaaatttgcaaagatggtagagcat
atattaaatactgaagaaaactggaattcatggaaaaatgagggctgcccaagttttgtg
aaagaaagaacatcagataccaagccaacaagattagttcggaagagaccagcaccagag
gacttcctagggaaagggcccaacaaaaagattctgatgggaaacgaggagttaacaagg
ctttggaatctctgtcctgataatatggaagcctgtaaatcagagacaagggaatacatg
cccactttggaggaattctttgaagaagccattgagcaggcagaccctgaaaacatggtt
gaaaatgaatataaagttgtgaacaattcaaattatggctggagagccctgagactgtta
gcaaggagaagccctcacttcttccagccaaccaaccagcagtttaaaagtttgccagag
tatcttgaaaacatggtaataaagctagccaaggaattaccaccgccttctgaagaaata
aaaacaggtgaggatgaagatgaggaagataatgatgctttactgaaggaaaatgaaagt
cctgatgttcggagagacaaacctgtaacaggggaacaaatagaggtatttgccagcaaa
ctgggtgaacagtggaagattctggctccctacttggaaatgaaagactcggaaattaga
cagattgagtgtgacagtgaagacatgaagatgagagctaagcagctactaattgcctgg
caagaccaagagggagtccatgcaacacctgacactctgattactgcactgaataagtct
ggattaggtgaccttgcagaaagtctaactaatgacagtgagacaaatagttag
DBGET
integrated database retrieval system
