Methylomonas koyamae: MKLM6_1845
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Entry
MKLM6_1845 CDS
T05118
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
mko
Methylomonas koyamae
Pathway
mko03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MKLM6_1845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mko03400
]
MKLM6_1845
DNA repair and recombination proteins [BR:
mko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MKLM6_1845
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MKLM6_1845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
UVR
ResIII
DEAD
AAA_30
HEM4
AAA_22
Kinesin
Motif
Other DBs
NCBI-ProteinID:
ATG90081
UniProt:
A0A291IIR6
LinkDB
All DBs
Position
2013380..2015476
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AA seq
698 aa
AA seq
DB search
MSDKRRMEISQSAISGVLAVEEPSVKGKGLQQKPFKIQSRYQPAGDQPAAIRQLVEGIND
GEVHQTLLGVTGSGKTFTIANVIQQTQRPAMIMAPNKTLAAQLYGEMKEFFPENSVEYFV
SYYDYYQPEAYIPASDTFIDKDASLNEHIEQMRLSATKALLERRDTIVVATVSAIYGLGE
PESYFQMVLHLVRGDMIKQRDILRRLAEMQYTRNDIELRRATYRVRGDVIDVFPAESEEQ
AVRIELFDDEIERLSMFDPLTGEVTQRLARFTLYPKSHYVTPRDQLLSAVEKIKLELVER
LAQLREDHKLVEAQRLEQRTLFDIEMIMEVGYCSGIENYSRHLSNRTEGESPPTMFDYLP
KDALVIIDESHVTVPQIGAMYKGDRSRKETLVEYGFRLPSALDNRPLRFEEFERICGQRI
YVSATPGGYEKEHSGAVVEQVVRPTGLVDPIVEVRPATSQVDDLLSEINKRIAVQERVLV
TTLTKRMSEDLTDYLMEHGIKVRYLHSDIETVERVEIIRDLRLGVFDVLVGINLLREGLD
IPEVSLVAILDADKEGFLRSLTSLIQTIGRAARNANGKVILYGDKITRSMQLAIDETERR
RAKQVEFNTQHNIQPRTVFKSVTDILELAIPGSGGSISAARAKVAEPAGDYKALTPKQAA
KALKQLEEKMYQHAKNLEFEDAARIRDQIKLLQAEMSV
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaaaaggcggatggagatcagccagtcggcgatatccggcgtactggcagtg
gaagaaccgtctgttaaaggcaaaggcttacagcaaaagccgttcaaaattcaaagccgc
tatcaaccggccggcgaccagcctgcagcgattcggcaattggttgaagggatcaacgac
ggcgaagtgcaccaaaccctgcttggggtgaccggttccggcaagacctttaccatcgcc
aacgtgatacagcagacgcaacggccggcgatgatcatggcgccgaacaaaacgctggcc
gcccagctctacggcgagatgaaggagttttttccggagaacagcgtcgagtactttgtt
tcctattacgactactaccagccggaagcctatattccggcttccgataccttcatcgac
aaggatgcgtcgctgaacgaacatatcgagcagatgcgtttgtcggccaccaaggccttg
ttggaacggcgcgataccatcgtcgtcgccaccgtatcggcgatttacggcttgggcgag
ccggaatcgtatttccagatggtgctgcatttggtgcgcggcgacatgatcaagcaacgc
gacattctgcgccggctggcggaaatgcaatatacccgcaacgatatcgagctacgccgc
gccacctaccgggtgcgcggcgacgtgatcgacgtgtttccggccgaatcggaagaacag
gctgtgcgtatcgaactgttcgacgacgagatcgaacgcctgtcgatgttcgatccgttg
accggcgaagtgacccagcgcctggctcggttcacgctgtacccgaagagccactatgtc
accccgcgcgaccagttgctcagcgcggtcgaaaaaatcaagttggagctggtggagcgg
ctggcgcagttacgcgaagaccataaactggtcgaagctcagcgcctggaacagcgtacg
ctgttcgatatcgaaatgatcatggaagtcggctactgctccggcatcgaaaattactcg
cggcatttgtcgaatcggaccgaaggcgagtcgccgccgaccatgttcgattatctaccg
aaagacgcgctggtcatcatcgacgaaagtcacgtcacggtgccgcagatcggggcgatg
tacaaaggcgaccgttcgcgcaaggaaactctggtcgaatacggattcagattgccctcg
gcgctggacaaccggccgttgcgtttcgaagagttcgaacgcatttgcgggcagcggatt
tacgtatcggccacgccgggcggttacgagaaggaacactccggcgccgtggtggagcaa
gtggtacgtccgaccggtttggtcgatccgatagtggaagtgcggccggccaccagccag
gtcgacgatttgctgtcggagatcaacaagcggattgcagtgcaggaacgggtgttggtg
acgacactgaccaaacgcatgtcggaagatttgaccgattacctgatggagcacggcatc
aaggtcaggtatctgcattcggatatcgagacggtggagcgggtagaaatcatccgcgat
ttgcggctgggcgtgttcgacgtgctggtcggcatcaacctgttgcgcgaggggctggat
atcccggaagtctcgctggtggcgattctggatgccgacaaggaaggttttttgcgttcg
ctgacctcgttgatccaaaccatcggccgcgccgcgcgtaatgccaacggtaaagtgatt
ttatatggcgacaaaatcacccgctcgatgcaattggccatcgacgaaaccgagcgtcgc
cgggcgaagcaggtcgagttcaatacgcagcataatattcagccgcgcaccgtattcaaa
tcggtcaccgacattctggaactggccataccgggttccggcggttcgatcagcgccgcc
cgcgccaaggtggcggaaccggccggcgactacaaagcgttgacgccgaagcaggcggcc
aaggcgctgaagcaactggaagagaagatgtaccagcacgccaagaatctggaattcgag
gatgctgcccgcatccgcgaccaaatcaaactgctgcaggcggaaatgtcggtctga
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