KEGG   Mandrillus leucophaeus (drill): 105531928
Entry
105531928         CDS       T08763                                 
Symbol
LIG1
Name
(RefSeq) DNA ligase 1 isoform X1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mleu  Mandrillus leucophaeus (drill)
Pathway
mleu03030  DNA replication
mleu03410  Base excision repair
mleu03420  Nucleotide excision repair
mleu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mleu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105531928 (LIG1)
   03410 Base excision repair
    105531928 (LIG1)
   03420 Nucleotide excision repair
    105531928 (LIG1)
   03430 Mismatch repair
    105531928 (LIG1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mleu03032]
    105531928 (LIG1)
   03400 DNA repair and recombination proteins [BR:mleu03400]
    105531928 (LIG1)
Enzymes [BR:mleu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     105531928 (LIG1)
    6.5.1.6  DNA ligase (ATP or NAD+)
     105531928 (LIG1)
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     105531928 (LIG1)
DNA replication proteins [BR:mleu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    105531928 (LIG1)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     105531928 (LIG1)
DNA repair and recombination proteins [BR:mleu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     105531928 (LIG1)
   NER (nucleotide excision repair)
    Other NER factors
     105531928 (LIG1)
   MMR (mismatch excision repair)
    Other MMR factors
     105531928 (LIG1)
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C PucR DUF1685 DDR
Other DBs
NCBI-GeneID: 105531928
NCBI-ProteinID: XP_011825355
Ensembl: ENSMLEG00000024179
UniProt: A0A2K5XQR1
LinkDB
Position
Unknown
AA seq 918 aa
MQRSIMSFFHPKKEGKAKKPEKEASNGSRETEPPPKAALKEWNGVSESDSPVKRPGRKAA
RVLGSEGEEEDEALSPAKGQKPAPDCSQVSPPRPATSPENNASLSDTSPRDSSPSGIPKR
RTARKQLPKRTIQEVLEEQSADEDREAKRKKEEEEVDTPEESLTEAEVATEKEGEDRDQP
TTPPKPLKTSEAETPTESVSEPEVATRQELQEEEEQTKPPRSAPKTLSSFFTPRKPAIKK
EVKEEEPGAPGKEGAAEGPLDPSGYNPAKNSYHPVEDACWKPGQKVPYLAVARTFEKIEE
VSARLRMVETLSNLLRSVVALSPPDLLPVLYLSLNHLGPPQQGLELGVGDGVLLKAVAQA
TGRQLESVRAEAAEKGDVGLVAENSRSTQRLMLPPPPLTASGVFSKFRDIARLTGSASTA
KKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLTPPGQEFPPAVV
DAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPEHCKLSPGIPLK
PMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRNQEDNTGKYPDI
ISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFD
LIYLNGESLVREPLSRRRQLLRENFVETEGEFVFATSLDTKDVEQIAEFLEQSVKDSCEG
LMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLA
SYDEDSEELQAICKLGTGFSDEELEEHHQSLKALVLPSPRPYVRIDGAVTPDHWLDPSAV
WEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQS
QIQNQQGEDSGSDPEDTY
NT seq 2757 nt   +upstreamnt  +downstreamnt
atgcagcgaagtatcatgtcattcttccaccccaagaaagagggtaaagcgaagaagcct
gagaaggaggcatccaacggcagcagagagacggagccccctccgaaggcggcactgaag
gagtggaatggagtgtccgagagtgactctccagtgaagaggccaggcaggaaggcggcc
cgggtcctgggcagcgaaggggaagaggaggatgaagcccttagccctgctaaaggccag
aagcctgccccagactgctcacaggtctccccgccccgtcctgccacatctcctgaaaac
aacgcttccctctctgacacctctcccagggacagctccccatcagggatcccgaagcgt
cgcacagctcggaagcagctcccgaaacggaccattcaggaagtcctggaagagcagagt
gcggacgaggacagagaagccaaaaggaagaaggaggaggaagaagtggataccccagaa
gaaagcctcacagaggctgaagtggcaacagagaaggaaggagaagacagggaccagccc
accacacctcccaagcccctaaagacctccgaagcagagaccccgacggaaagcgtttcg
gagcccgaggtggccacgaggcaggaactgcaggaggaggaagagcagaccaagcctccc
cgcagcgctcccaagacactcagcagcttcttcacgccccggaagccagcaatcaaaaaa
gaagtgaaggaggaggagccaggggctccaggaaaggagggagctgctgagggacccctg
gacccatccggttacaatcctgccaagaacagctaccatcccgtggaagacgcctgctgg
aaaccgggccagaaggtcccttacctggctgtggcccggacgtttgagaagatcgaggag
gtgtctgcccggctccggatggtggagacactgagcaacttgctgcgctccgtggtggcc
ctgtcacctccagacctcctcccggtcctctacctcagtctcaaccaccttgggccaccg
cagcagggcctggagcttggcgtgggtgatggcgtccttctcaaggcagtggcccaggcc
acaggtcggcagctggagtccgtccgggctgaggcagccgagaagggcgacgtggggctg
gtggccgagaacagccgcagcacccagaggcttatgctgccaccacctccgctcactgct
tccggggtcttcagcaagttccgtgacatcgccaggctcactggcagtgcttccacagcc
aagaagatagacatcatcaaaggcctctttgtggcctgccgccactcagaagcccggttc
atcgccaggtccctgagcggacggctacgccttgggctggcagagcagtcggtgctggcc
gccctctcccaggctgtgagcctcacgcccccaggccaagaattcccaccagccgtggtg
gatgctgggaagggcaagacagcagaggccagaaagacgtggctggaggagcaaggcatg
atcctgaagcagacattctgtgaggtgcccgacctggaccgaattatccccgtgctgctg
gagcacggcctggaacgtctcccggagcactgcaagctgagcccagggattccgctgaaa
ccaatgttggcccatcccacgcggggcgtcagtgaggtcctgaaacgctttgaggaggca
gctttcacctgcgaatacaaatacgatgggcagagggcgcagatccacgccctggaaggc
ggggaggtgaagatcttcagcaggaatcaggaagacaacactggaaagtacccggacatc
atcagccgcatccccaagattaaactcccatcggtcacatccttcatcctggacacggaa
gccgtggcttgggaccgggaaaagaagcagatccagccattccaagtgctcaccacccgc
aaacgcaaggaagtggatgcgtccgagatccaggtgcaggtgtgtttgtacgccttcgac
ctcatctacctcaatggagagtccctggtacgtgagcccctttcccggcgccggcagctg
ctccgggagaactttgtggagacggagggcgagtttgtcttcgccacctctctggacacc
aaggacgtcgagcagatcgccgagttcctggagcagtcggtgaaagactcctgtgagggg
ttgatggtgaagaccctggatgtcgatgccacctacgagatcgccaagagatcgcacaac
tggctcaagctgaagaaggactaccttgatggcgtgggtgacaccctggacctggtggtg
atcggcgcctacctgggccgggggaagcgggccggccggtacgggggcttcctgctggcc
tcctatgacgaggacagtgaggagctgcaggccatatgcaagcttggaactggcttcagc
gacgaggagctggaggagcatcaccagagcctcaaggccctggtgctgcccagcccccgc
ccttatgtgcggatagatggtgccgtgactcccgaccactggctggaccccagcgccgtg
tgggaggtgaagtgtgccgacctctccctctcccccatctaccctgctgcgcggggcctg
gtggatagtgacaaggggatctcccttcgcttccctcggtttattcgagtccgtgaagac
aagcagccggagcaggccaccaccagtgcacaggtggcctgtttgtaccggaagcaaagt
cagattcagaaccaacaaggcgaggactcaggctctgaccctgaagatacctactaa

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