Mandrillus leucophaeus (drill): 105547111
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Entry
105547111 CDS
T08763
Symbol
UPF1
Name
(RefSeq) regulator of nonsense transcripts 1
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
mleu
Mandrillus leucophaeus (drill)
Pathway
mleu03013
Nucleocytoplasmic transport
mleu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mleu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105547111 (UPF1)
03015 mRNA surveillance pathway
105547111 (UPF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mleu03019
]
105547111 (UPF1)
Enzymes [BR:
mleu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
105547111 (UPF1)
5.6.2.5 RNA 5'-3' helicase
105547111 (UPF1)
Messenger RNA biogenesis [BR:
mleu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
105547111 (UPF1)
mRNA cycle factors
Common to processing body (P body) and stress granule
105547111 (UPF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
UPF1_Zn_bind
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
ResIII
SLFN-g3_helicase
ATPase
nSTAND3
DEAD
Helicase_RecD
AAA_16
UvrD-helicase
SRP54
UvrD_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
105547111
NCBI-ProteinID:
XP_011845934
Ensembl:
ENSMLEG00000028404
LinkDB
All DBs
Position
Unknown
AA seq
969 aa
AA seq
DB search
MDRERHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRNVFLLGFIPAKADSVVVLLC
RQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQQINKLEELW
KENPSATLEDLEKPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLEADYDKKLKESQTQDNI
TVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIKVPDNYGD
EIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHE
VEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTVTSATIVYHL
ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD
SMPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQ
FRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLV
VLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDKPMFFY
VTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQF
SGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLNVALTRARYG
VIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLVNTINPGARF
MTTAMYDAREAIIPGSVYDRSSQGRPSSMYFQTHDQIGMISAGPSHVAAMNIPIPFNLVM
PPMPPPGYFGQANGPAAGRGTPKGKTGRGGRQKNRFGLPGPSQTNLPNSQASQDVASQPF
SQGALTQGYISMSQPSQMSQPGLSQPELSQDSYLGDEFKSQIDVALSQDSTYQGERAYQH
GGVTGLSQY
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtgaacgccatattgtaaatcaccttgtgagggcaaaatgcaaagaggtgacc
ctgcacaaggacgggcccctgggggagacagtcctggagtgctacaactgcggctgtcgc
aatgtcttcctcctcggcttcatcccagccaaagctgactcggtggtggtgctgctgtgc
aggcagccctgtgccagccagagcagcctcaaggacatcaactgggacagctcgcagtgg
cagccactgatccaggaccgctgcttcctgtcctggctggtcaagatcccctccgagcag
gagcagctgcgggcgcgccagatcacggcacagcagatcaacaagctggaggagctatgg
aaggaaaacccttctgccacgctggaggacctggagaagccgggggtggacgaggaaccg
cagcacgtcctcctgcggtatgaggacgcctaccagtaccagaacatattcgggcccctg
gtcaagctggaggccgactacgacaagaagctgaaggagtcccagactcaagataacatc
acggtcaggtgggacctgggccttaacaagaagagaatcgcctacttcactttgcccaag
actgactctgacatgcggctcatgcagggggatgagatatgcctgcggtacaaaggggac
cttgcgcccctgtggaaagggatcggccacgtcatcaaggtccctgataattatggcgat
gagattgccattgagctgcggagcagcgtgggtgcacccgtggaggtgactcacaacttc
caggtggattttgtgtggaagtcgacctcctttgacaggatgcagagtgcattgaaaacg
tttgccgtggacgagacctcagtgtccggctacatctaccacaagctgctgggccacgag
gtggaggacgtaatcatcaagtgccagctgcccaagcgcttcacggcgcagggcctccct
gacctcaaccactcccaggtttatgccgtgaagactgtgctgcaaagaccgctgagcctg
atccagggcccgccaggcacggggaagacagtgacgtcggccaccatcgtctaccacctg
gcccggcaaggcaacgggccggtgctggtgtgtgctccgagcaacatcgccgtggaccag
ctaacagagaagatccaccagacggggctgaaggtcgtgcgcctctgtgccaagagccgc
gaggccatcgactccccagtgtctttcctggcccttcacaaccagatcagaaacatggac
agcatgcctgagctgcagaagctgcagcagctgaaagatgagactggcgagctgtcgtct
gccgacgagaagcggtaccgggccttgaagcgtaccgcggagagagagctgctgatgaat
gcagatgtcatctgctgcacatgtgtgggcgccggcgacccaagactggccaagatgcag
ttccgctccattttaatcgacgaaagcacccaggccactgagccagagtgcatggttccc
gtggtccttggggccaagcagctgatccttgtaggtgaccactgccaactgggcccggtg
gtgatgtgcaagaaggcggccaaagccgggctgtcgcagtcgctcttcgagcgcctggtg
gtgctgggcatccggcccatccgcctgcaggtccagtaccggatgcaccctgcactcagc
gccttcccgtccaacatcttctacgagggctccctccagaatggtgtcactgcagcggat
cgtgtgaagaagggatttgacttccagtggccccagcccgataaaccgatgttcttctac
gtgacccagggccaagaggagatagccagctcgggcacctcctacctgaacaggaccgag
gctgcgaacgtggagaagatcaccacgaaattgctgaaggcaggcgccaagccggaccag
attggcatcatcacgccctacgagggccagcgctcctacctggtgcagtacatgcagttc
agcggctccctgcacaccaagctctaccaggaggtggagatcgccagtgtggacgccttt
cagggacgcgagaaggacttcatcatcctgtcctgtgtgcgggccaacgagcaccaaggc
attgggtttttaaatgaccccaggcgtctgaacgtggccctgaccagagcaaggtacggc
gtcatcatcgtgggcaacccgaaggcgctgtcgaagcagccactctggaaccacctgctg
aactactacaaggagcagaaggtgctggtggaggggccgctcaacaacctgcgcgagagc
ctcatgcagttcagcaagccacgcaagctggtcaacaccatcaacccgggagcccgcttc
atgaccacagccatgtatgatgcccgggaggccatcatcccaggctccgtctatgatcgg
agcagccagggccggccctccagcatgtacttccagacccatgaccagattggcatgatc
agtgccggccccagccacgtggctgccatgaacattcccatccccttcaacctggtcatg
ccgcccatgccaccgcctggctattttggacaagccaatgggcccgctgcaggccgaggc
accccgaaaggcaagactggccgtgggggacgccagaagaaccgctttgggcttcctggg
cccagccagaccaacctccccaacagccaagccagccaggatgtggcgtcacagcccttc
tctcagggcgccctgacgcagggctacatctccatgagccagccctcccagatgagccag
cccggcctctcccagccggagctgtcccaggacagttaccttggtgatgagtttaaatca
caaatcgacgtggcgctctcgcaggactccacgtaccagggagagagggcgtaccagcat
ggcggggtgacggggctgtcccagtactaa
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integrated database retrieval system
