Methylovirgula ligni: CWB41_06490
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Entry
CWB41_06490 CDS
T05824
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
mlg
Methylovirgula ligni
Pathway
mlg00521
Streptomycin biosynthesis
mlg00523
Polyketide sugar unit biosynthesis
mlg00541
O-Antigen nucleotide sugar biosynthesis
mlg01100
Metabolic pathways
mlg01110
Biosynthesis of secondary metabolites
mlg01250
Biosynthesis of nucleotide sugars
Module
mlg_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
mlg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CWB41_06490 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CWB41_06490 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CWB41_06490 (rfbC)
Enzymes [BR:
mlg01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CWB41_06490 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
DUF6021
Motif
Other DBs
NCBI-ProteinID:
QAY95424
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All DBs
Position
complement(1326397..1326951)
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AA seq
184 aa
AA seq
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METTTFPISGPLLLRPKRIEDSRGFFSETYNERLFREALGDVRFVQDNQSLSTQAGTIRG
LHFQSPPAEQGKLVRVLRGAVFDVAVDIRRGSPTYGKFVSATLSAENWTQLWVPAGFAHG
FCTLEPDSEVLYKVTSYYSRGHDLGLAWDDPELDIPWPVAPGRAVLSDKDHAHPMLRDLP
AYFS
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgacgactttccccatttccggtccattgctgttgcgaccgaaaagaatcgaa
gattcgcgcggcttcttttcggaaacatataacgaaagacttttccgcgaggcgctcggc
gacgtccgttttgttcaggacaatcaatcgctatcgacgcaggccgggacgatccgcggg
ctgcatttccaatcgccgccggctgagcagggcaagctcgtgcgcgttttgcgcggcgcg
gtattcgacgtcgcggtcgatattcggcgcgggtccccgacctacggcaaattcgtctcg
gcgaccctgagcgcggaaaattggacgcagctctgggttccggccggcttcgcgcatggc
ttctgtacgctcgaacccgatagcgaagtgctctacaaggtgacgtcttattattcccgc
gggcatgaccttggccttgcctgggacgatcccgaactggatattccctggcccgtggca
ccaggtcgcgccgtcctctccgacaaggaccatgctcatcccatgctcagggatctgccg
gcttatttttcctag
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