Microbacterium liquefaciens: NMQ05_10810
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Entry
NMQ05_10810 CDS
T08516
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mliq
Microbacterium liquefaciens
Pathway
mliq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mliq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NMQ05_10810 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mliq03021
]
NMQ05_10810 (rho)
03019 Messenger RNA biogenesis [BR:
mliq03019
]
NMQ05_10810 (rho)
Transcription machinery [BR:
mliq03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NMQ05_10810 (rho)
Messenger RNA biogenesis [BR:
mliq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NMQ05_10810 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
NACHT
Spore_III_AA
ATPase_2
AAA_22
VWA_2
Motif
Other DBs
NCBI-ProteinID:
UTT51585
LinkDB
All DBs
Position
complement(2181045..2182949)
Genome browser
AA seq
634 aa
AA seq
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MENLSETQNDQSAPTAEAPAASAESATESAPARKRAPRRASTATAAAKAEKAEAAKAEKA
AKSDAAPEAAAPETASAGAEPTEAAPKAKAPRRSRAKKADAEAPAADTAAAEAPAPEAAP
AEAPAEPAPKTTGHGRRGAQKPAADAEAPAAEQSAESASEAAPAETSQNNDSDSSDGGEE
QGGRGRNRSRSRNRGRGQNGAAQEQQQAQPAADDDQAGGNNRNRQRNKRRSGTPTDEFDT
EIGEDDVLIPIAGILDVLDNYAFVRTTGYLAGPSDVYVSLGQVKKYNLRKGDAVVGSIKQ
PREGEQQGRQKYNALVKVDSINGLSVDDAATRVEFGKLTPLYPQERLRLETAPEKLTQRI
IDLVAPIGKGQRGLIVAPPKAGKTIVLQQIANAIAQNNPEVHLMVVLVDERPEEVTDMER
TVKGEVIASTFDRPAEDHTTVAELAIERAKRLVELGRDVVVLLDSITRLGRAYNLAAPAS
GRVLTGGVDASALYPPKRFFGAARNIENGGSLTILATALVETGSKMDEVIFEEFKGTGNS
ELRLSRSLADKRIFPAVDVNASSTRREEMLLSADEVKITWKLRRALAGLDQQQALEVVLG
KLKETNSNVEFLVQMQKSIPTLPSGAHGHDNNIR
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacctctccgagacccagaacgaccagtcggcgcccaccgccgaagcacccgcg
gcatccgcggagtcggccaccgagtccgcaccggcgcgcaagcgcgcaccgcgtcgcgcc
agcaccgccacggcggcagccaaggccgagaaggccgaagcggcgaaggccgagaaggcc
gcgaagtcggatgctgcgcccgaagccgccgcccccgagacggcatccgcaggtgcggag
cccaccgaggccgcgcccaaggcgaaggcgccgcgtcgcagccgcgccaagaaggccgac
gccgaggctccggccgccgacaccgctgctgcggaagcgcccgcccccgaggcggcaccc
gccgaggcccctgccgagcccgcccccaagacgaccgggcatggacgccgcggtgcgcag
aagcccgccgcagatgccgaggcacccgccgcggagcagtcagcggagtccgcctccgaa
gcggctcccgcggagacctcacagaacaacgactccgactcctccgacggtggcgaggag
cagggcggtcgcggtcgcaaccgcagccgcagccgcaatcgcggacgcgggcagaacggc
gccgcgcaggagcagcagcaggcgcagccggcggctgacgatgaccaggccggcggcaac
aaccgcaaccgtcagcgcaacaagcgccgcagcggcaccccgaccgacgaattcgacacc
gagatcggcgaggacgacgtcctgatcccgatcgccggcatcctcgatgtgctcgacaac
tacgctttcgtccgcacgaccggctacctcgccggtcccagcgacgtgtacgtgtccctc
ggacaggtgaagaagtacaacctgcgcaagggcgacgccgtcgtcggctcgatcaagcag
ccccgcgagggcgagcagcagggtcgccagaagtacaacgcgctggtcaaggtcgactcg
atcaacggcctctcggtcgacgacgccgccacccgcgtggagttcggcaagctcacgccg
ctctacccgcaggagcgtctgcgtctggagacggcccctgagaagctgacccagcgcatc
atcgacctggtcgccccgatcggcaagggccagcgcggcctcatcgtcgcgccgcccaag
gcgggtaagaccatcgtcctgcagcagatcgccaacgcgatcgcgcagaacaaccccgag
gtccacctcatggtcgtgctcgtcgacgagcgcccggaagaggtcaccgacatggagcgc
acggtgaagggagaggtcatcgcctcgaccttcgatcgccccgctgaggaccacaccacg
gtcgccgagctcgctatcgagcgcgccaagcgcctggtcgagctgggccgcgacgtcgtc
gtgctgctcgactcgatcacccgcctcggacgcgcgtacaacctcgccgccccggcctcg
ggtcgtgtgctcaccggtggcgtcgacgcctcggcgctgtacccgcccaagcgcttcttc
ggtgccgcgcgcaacatcgagaacggtggatcgctcaccatcctcgcgaccgcgctcgtc
gagaccggttccaagatggacgaggtcatcttcgaggagttcaagggcaccggcaacagc
gagctgcgcctgtcgcgctcgctcgccgacaagcgcatcttcccggccgtcgacgtcaac
gcgtcgagcacccgccgcgaagagatgctgctctcggccgacgaggtcaagatcacgtgg
aagctgcgtcgcgccctcgccggcctcgaccagcagcaggccctcgaggtcgtgctcggc
aagctcaaggagaccaactccaacgtcgagttcctcgtgcagatgcagaagtcgatcccg
acgctcccctcgggcgcgcacgggcacgacaacaacatccgctga
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