Massilia litorea: LPB04_12825
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Entry
LPB04_12825 CDS
T09729
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
mlir
Massilia litorea
Pathway
mlir03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mlir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LPB04_12825 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlir03400
]
LPB04_12825 (uvrB)
DNA repair and recombination proteins [BR:
mlir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LPB04_12825 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LPB04_12825 (uvrB)
BRITE hierarchy
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
Kinesin
DUF2785
Motif
Other DBs
NCBI-ProteinID:
QOL52016
UniProt:
A0A7L9UD15
LinkDB
All DBs
Position
complement(2875970..2878036)
Genome browser
AA seq
688 aa
AA seq
DB search
MITFPNSPFKLHQPFPPAGDQPTAIEGLVEGIEDGLMYQTLLGVTGSGKTYTMANVIARA
GRPAIIFAPNKTLAAQLYSEMREFFPQNAVEYFVSYYDYYQPEAYVPQRDLFIEKDSSIN
EHIEQMRLSCTKSLMERRDVVIVATVSAIYGIGNPNEYHKMILTLRHKDKVAQRDIIARL
IQMQYSRNEMDFGRGTFRVRGDTIDIFPAEHAELAIRVEMFDDEIESLQLFDPLTGRVRQ
KIPRFTVYPGSHYVTPRSTVLRAVESIKAELKDRLEEFRQQNKLIEEQRLEQRTRFDLEM
MAEIGFTKGIENYSRHLSGAMPGEPPPTLVDYLPKDALMFMDESHVLVGQLSAMYNGDRS
RKTNLVDYGFRLPSALDNRPLKFEEFEGKMRQTIFVSATPAEYENAHADNVVEQVVRPTG
LVDPVIIVRPALSQVDDVMSEINDRIKKNERVLITTLTKRMAEQLTEYLSDHGIKVRYLH
SDIETVERVEILRDLRLGTFDVLIGINLLREGLDLPEVSLVAVLDADKEGFLRSERSLIQ
TIGRAARNLNGVAILYADRITDSMRRAIDETERRRAKQIAFNEANGITPVGVQKKIKELI
DGVYSNAAQKAMAEGALGLEEAAQVAKVEAMSEKQISKEIKRLEKLMVDHAKNLEFEKAA
QMRDQLHVLKQQAFGAPGADNVVSMLGK
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaccttcccgaactcgcccttcaagctgcaccagcctttcccgccggccggcgac
cagccgaccgcgatcgaaggactggtcgagggcatcgaagacggcctgatgtaccagacg
ctgctcggcgtgaccggttccggcaagacgtacacgatggccaacgtgattgcccgcgcc
ggccgtccggccatcatctttgcgccgaacaagaccctggccgcccagctgtattcggaa
atgcgcgaattctttccgcagaacgcggtcgagtatttcgtgtcctactacgattactac
cagccggaagcctatgtgccgcagcgcgacctgttcatcgaaaaggactcgtcgatcaac
gagcacatcgagcagatgcgcctgtcgtgcacgaaatccctgatggagcggcgcgacgtc
gtcatcgtcgccaccgtctcggccatctacggtatcggtaatccgaacgaatatcacaag
atgatcctgacgctgcgccacaaggataaagtagcccagcgcgacatcatcgcgcgcctg
atccagatgcagtattcgcgcaacgaaatggactttggacgcggcaccttccgcgtgcgc
ggcgacacgatcgacatcttcccggccgagcacgcggaactcgcgatccgcgtcgagatg
ttcgacgatgaaatcgaatcgctgcaattgttcgacccgctgaccggccgcgtgcgccag
aagatcccgcgttttacggtgtacccgggttcgcactacgtcacgccgcgctcgaccgtg
ctgcgcgccgtcgagtcgatcaaggccgagctgaaggaccggctggaagaattccgccag
caaaataaattgatcgaagagcagcgcctggaacagcgtacccgtttcgacctcgaaatg
atggccgagatcggcttcacgaaaggcatcgagaactattcgcgccacctgtcgggcgcg
atgccgggcgaaccgccgcccaccctggtcgactacctgccgaaggacgcgctgatgttc
atggacgagtcgcacgtgctcgtcggccagctctcggccatgtacaacggcgaccgttcg
cgcaagacgaacctggtcgactacggcttccgcctgccgtcggcgctggacaaccggccg
ctgaaattcgaagagttcgaaggcaagatgcggcagacgattttcgtgtccgccaccccg
gcagagtacgagaatgcgcatgccgacaacgtggtcgagcaggtggtgcgtccgaccggc
ctggtcgacccggtgatcatcgtgcgccctgccctgtcgcaggtggacgacgtgatgagc
gagattaacgaccgcatcaagaagaacgagcgcgtcctgatcaccacgctcaccaagcgc
atggccgagcagctgacggaatacctgagcgaccacggcatcaaggtgcgctacctgcac
agcgacatcgagacggtcgagcgcgtcgagattctgcgcgacctgcgcctgggcaccttc
gacgtgctgatcggtattaacctgctgcgcgagggcctggacttgccggaagtgtcgctg
gtggccgtgctggacgcggacaaggaaggttttctccgttccgagcgttcgctgatccag
accatcggccgtgcggcgcgtaacctgaacggcgtggcgatcctgtacgccgaccgcatc
accgactcgatgcgccgcgccatcgacgaaaccgagcgccgtcgcgccaagcagatcgcc
ttcaacgaggcgaacggcatcaccccggtgggcgtgcagaagaagatcaaggaactgatc
gacggcgtctacagcaatgccgcgcagaaggccatggccgagggcgcgttgggactggaa
gaagctgcgcaggtggccaaggtcgaggcgatgagcgagaagcagatttcgaaggaaatc
aagcgcctcgagaagctcatggtcgaccacgccaagaacctcgagttcgagaaggcggcg
cagatgcgcgaccagctgcatgtgctcaagcagcaggccttcggggcgccgggggcggac
aacgtggtgtcgatgttgggcaagtaa
DBGET
integrated database retrieval system
