Mycobacterium lacus: MLAC_32230
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Entry
MLAC_32230 CDS
T07377
Symbol
ligD
Name
(GenBank) multifunctional non-homologous end joining protein LigD
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
mlj
Mycobacterium lacus
Pathway
mlj03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mlj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
MLAC_32230 (ligD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlj03400
]
MLAC_32230 (ligD)
Enzymes [BR:
mlj01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
MLAC_32230 (ligD)
DNA repair and recombination proteins [BR:
mlj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
MLAC_32230 (ligD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
DNA_primase_S
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
BBX97929
UniProt:
A0A1X1XZE5
LinkDB
All DBs
Position
complement(3437180..3439435)
Genome browser
AA seq
751 aa
AA seq
DB search
MAGPSVKLTNADKVLYPATGTTKRDVFDYYTGIAEVMVPHIAGRPATRKRWPNGVDQASF
FEKQLASSAPAWLPRASVTHRSGTTMYPIIDSVAGLAWIAQQAALEVHVPQWRFVAEWTR
SGERLKPGPATRLVFDLDPGEGVTMAQLTEVARAVRELIADIGLTTFPVTSGSKGLHLYA
PLDEPVSSAGATVLAKRVARQLEKAMPKLVTSAMTKSLRAGKVFLDWSQNNGSKTTIAPY
SLRGREHPTVAAPRGWEELDDPELGQLRYDEVLARVTRDGDLLAPLDAGLPSRDRLTKYR
GMRDASKTPEPVPSAKPVTGPGNTFVIQEHHARRLHYDFRLERDGVLVSWAVPKNLPETT
SVNHLAVHTEDHPLEYATFEGTIPKGEYGAGRVIIWDSGTYEAEKFRDDEVIVTLHGSRI
SGRYALIQTNGDHWLAHRMKDQKVFEFGALAPMLCTHGSVAGLKAGQWAFEGKWDGYRLL
VEADHGTLRLRSRSGRDVTGEYPQLRSLATDLADHHVVLDGEVVALDRAGVPSFTEMQNR
GRATRIEFWAFDLLYLDGRSLLRARYLDRRKLLETLSSGTDLVVPELLPGDGADALEYSR
TRGWEGVIAKRRDSNYQPGRRSASWIKDKHWNTQEVVIGGWRVGEGGRSSGIGSLLMGIP
GPGGLHYAGRVGTGFTERDLANLKEALAPLHTDESPFDAPLPTRDARGVTFVKPALVGEV
RYSEWTPDNRLRQTSWRGLRQDKKPNEVVRE
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaccatcggtgaagctgaccaacgccgacaaggtgctgtatcccgcgaccgga
accacaaagcgagacgtcttcgactattacaccggcatcgccgaggtcatggtcccgcac
atcgccgggcgtccggcaacccgcaagcgctggcccaacggcgtcgaccaagcctcgttc
ttcgaaaagcagctggcgtcgtcggcacctgcctggctgccacgcgcgagcgtgacgcac
cggtccggaaccacgatgtatccgatcatcgacagcgtcgccggactggcctggatcgcg
cagcaggcggcgctggaggtacacgtgccacagtggcggtttgtcgccgagtggacgcga
agcggggaacgactgaagccgggcccggcaacacgattggtgttcgacctggaccccggc
gagggcgtgaccatggcccagctgaccgaggtggcacgtgcggtccgggaactcatcgcc
gatatcggactcaccacgttcccggttaccagcggcagcaaagggctgcacctgtatgcg
ccgctggacgaaccggtgagcagcgcgggcgccaccgtgctggccaaacgcgttgcgcgg
caactggaaaaggcgatgcccaagttggtcacctcggccatgaccaagagcctgcgggcg
ggaaaggtgttcctggactggagccagaacaacggctcgaagaccaccatcgcgccgtac
tcgctgcgtggccgggagcatccgacggtcgcggcgccacgcggttgggaggaactcgac
gaccccgagctgggtcagctgcgctacgacgaggtgctggcccgggtcacccgggatggg
gatctgctcgcccccctggacgccggcctgcccagccgggaccggttgaccaaataccgc
ggcatgcgtgacgcatcgaaaacacccgagccggtgccgagcgcgaaacccgttaccggc
ccgggcaatacgttcgtcatccaggagcaccatgcccgtcggctgcactacgactttcgg
ctggaacgagatggcgtgctggtgtcctgggcggtgcccaagaacctgcccgagaccacg
tcggtgaaccatctggcggtacacaccgaggatcatccgctggagtacgccacgttcgag
ggcaccatccccaagggcgaatacggcgccggcagggtgatcatctgggattccggcacc
tacgaggccgagaagttccgcgacgacgaggtgatcgttactttgcacggcagccggatc
tccgggcggtacgcgctgattcagaccaacggtgaccactggctggcgcaccgaatgaaa
gaccagaaggtcttcgagttcggcgcgctggcgccgatgctctgcacccacggttcggtg
gccggtctgaaggcgggtcagtgggccttcgagggcaagtgggacggctaccggctcctg
gtcgaggccgatcacgggaccctgcggctgcgatcgcgcagcggacgtgacgtcaccggc
gagtatccccaattgcgctcgttggcaaccgatctggcggaccatcacgtggtgctcgat
ggcgaagtcgtcgcgctcgaccgggccggcgtgcccagcttcaccgaaatgcagaaccgg
ggccgcgccacccgcatcgaattctgggcgttcgacctgctctacctcgacggacgctca
ctgctgcgggcccgctacctcgaccggcgcaagctgctggaaaccttgtccagcggaacg
gatctcgtcgttcccgagctgctacctggagacggggcggacgcgctggagtactcccgc
acgcgcgggtgggagggcgtgatcgccaagagacgcgactccaactatcaacccggccgg
cgctcggcgtcgtggatcaaggacaagcactggaacacccaggaagtcgttatcggcggc
tggcgggtcggcgagggcggacgcagcagcggcatcggctcgctgttgatgggcataccc
ggtcccggcggcctgcattacgccggccgggtcggcaccggcttcaccgagcgcgacctc
gccaacctcaaggaggcgctggcgccgctgcacaccgacgaatctccgttcgacgccccg
cttcccacacgtgacgccaggggggtcacgttcgtgaaaccggcgctggtcggcgaggtg
cgttacagcgagtggactccggacaaccggctgcgccaaaccagctggcgcgggctgcgg
caggacaaaaagccgaatgaggtggtgcgcgaatga
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