Melampsora larici-populina: MELLADRAFT_46475
Help
Entry
MELLADRAFT_46475 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
mlr
Melampsora larici-populina
Pathway
mlr03022
Basal transcription factors
mlr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MELLADRAFT_46475
09124 Replication and repair
03420 Nucleotide excision repair
MELLADRAFT_46475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlr03021
]
MELLADRAFT_46475
03400 DNA repair and recombination proteins [BR:
mlr03400
]
MELLADRAFT_46475
Transcription machinery [BR:
mlr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MELLADRAFT_46475
DNA repair and recombination proteins [BR:
mlr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MELLADRAFT_46475
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
18928343
NCBI-ProteinID:
XP_007403887
JGI:
Mellp1_46475
UniProt:
F4R4S3
LinkDB
All DBs
Position
Unknown
AA seq
454 aa
AA seq
DB search
MEKKDQNEISSSLSEFLHDLPEQTLSRLYESPSSCLSIFRLLPSLARHLILNSLWSSIHS
FNLTQLKLWSTSIKFESNQSSQSTLAKLIHLHLIHSSNLTLHPTFKQNFQLALTGGGDHK
SFGLPCKTSSKVDLLTLDQYAKQNWETILHFMVGSNWSNRPSSKIITLLTFSGLISSQNS
KITSVGFQFLLDDINTQLWELLLQYLKMAEANDLDIVDVLSCLFMLGSLELGKEYSMKNF
SDTQVQVLNDLVDYGLVYLTQSKTFYPTRLVTTLTSTAPPIVSNPSDQSSSDPNEFLILE
TNYRIYAYTSNPLQIAILNLFISFKSRFPNLVIGSITRESIKMAFKNGIRADQIISYLEF
HSHSQMKLLKPILPNTVVDQIRLWELEKNRVRDQEGYLYEDFKSVSDYEIVINYSKQIDI
ILWENPELKKFFVSLDGHTALREFIKRRIMSNGN
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaaagatcaaaacgaaatcagttcaagtttatccgaattcctacacgattta
ccagaacaaactctttctagattatacgaatcaccttcaagttgtttatcaatctttaga
ttattaccttccttagcaagacatttgattttaaattcactttggtcttctattcattct
tttaatctcactcaacttaaactttggtctacttcaattaaatttgaatctaatcaaagc
tctcaatccactctagccaaactaattcatctccatctaatccattcatcaaacctcacc
ctacatcccaccttcaaacaaaactttcaactagccctaaccggaggtggggatcataaa
tcgtttggattaccatgtaaaacttcatcaaaagttgatcttcttactctagaccaatat
gccaaacaaaattgggaaacgattttacattttatggtaggatctaattggtcaaacaga
cctagttcaaagatcatcactttacttacttttagtggtttgatttcttctcagaattct
aagatcacttctgttgggtttcagttcttgttagatgatatcaatactcaattatgggaa
ctcttattacaatacctcaagatggcagaagctaatgatttggatattgtggatgtgctt
tcttgtttgtttatgttgggtagtttagaattaggtaaagaatactctatgaagaatttc
tcggatactcaagttcaggtcttaaatgatttagtagactacggtttagtttatttaact
caatctaaaacgttttatcctactagattagtcactacacttacttctactgcaccaccg
atcgtttcaaacccatcagaccaatcatcatcagaccccaacgagtttttaatcctagaa
accaattaccgaatctacgcctataccagtaatccattacaaatcgcgatcttgaatctg
tttataagttttaaatcaaggtttccgaacctggtcatcggatcgatcacacgagaaagt
attaagatggcttttaagaatgggattcgagctgatcagattatatcttatttggaattc
cattcacattctcagatgaagttattgaaacctattttgcctaatactgttgtggatcag
attaggttgtgggaacttgaaaagaatagggttagggatcaagaaggttatctttatgaa
gattttaaatctgtttctgattacgaaatcgttattaattattcaaaacagattgatatt
atcttatgggagaatccagaattaaagaaattctttgtgagtttagatggacatactgct
cttcgagagtttattaagagaaggattatgtccaatgggaattga
DBGET
integrated database retrieval system
