Melampsora larici-populina: MELLADRAFT_78386
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Entry
MELLADRAFT_78386 CDS
T03138
Name
(RefSeq) hypothetical protein
KO
K14328
regulator of nonsense transcripts 3
Organism
mlr
Melampsora larici-populina
Pathway
mlr03013
Nucleocytoplasmic transport
mlr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mlr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MELLADRAFT_78386
03015 mRNA surveillance pathway
MELLADRAFT_78386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlr03019
]
MELLADRAFT_78386
Messenger RNA biogenesis [BR:
mlr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
MELLADRAFT_78386
mRNA cycle factors
P-body specific factors
MELLADRAFT_78386
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
18933101
NCBI-ProteinID:
XP_007412681
JGI:
Mellp1_78386
UniProt:
F4RTQ9
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MTERNKVVIRHLPPALPEEVFWKTLSPWIDPINESTPAKCLVTYKSFIPGKLRQNKGKID
LPSRAYLYFSSVEDLVEFHHGYAQQAFRDSRGNITVPKIEFAPFQKIPTQVKKLDPRCGT
IDSSQDYQLFLKKLESPLNQETEDDSNQSNLTEDSTKLEIPKITPLIQHLRSLRKSAQEA
TTAQKLQQRNTTTTSASKVSSIKDPHDLPPHQLIKRAPTSSNHQSLPLTTKPSKSRPVPS
SFKPSKGNPTTSNVPKSTGTSSVPKPSVIDPVEPKPQTAPSKPKRGKRAIDQASQSKPIT
DPSGSNNPKPIPMKIVSRPKEILLKPSGSGSVPVSTESFKTSKVGNQEVNLHQPNPNLSQ
EGKPSSKKPYPKGSSSTSRPNPSKRNQPSTPTLGTSTPPTETRSTNETKSAATSTTNPRA
RGTEESAGARRRLGMALAGIGGTNERKSSRKDTPKNVPNP
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaagaaacaaagtagtcattcgacatttaccaccagctttacccgaagaagta
ttctggaaaactctttcaccttggatcgatcctatcaacgaatctacacctgctaaatgt
ttagttacttataaatcgtttattcctggtaaactaagacaaaataaaggaaaaatcgat
ttaccttcaagagcttatctttatttttcaagtgttgaagatttagttgaatttcatcat
ggttatgctcaacaagcttttcgtgatagtagaggtaatattactgtacctaaaatcgaa
ttcgcaccatttcaaaagattccaacccaagtcaaaaaactagatccacgttgtggaacc
attgattcttctcaagattatcaactttttcttaaaaaacttgaatcacctttaaatcaa
gaaacagaagatgattcaaaccaatccaatctaactgaagattcaaccaaactagaaatt
cccaaaatcacacccttaatccaacacttacgatcactaagaaaatcagcacaagaagcc
acaacggctcaaaaactacaacaacgcaatacaactactacttcagcttccaaagtttct
tctattaaagacccacacgatttacctcctcatcagcttatcaaacgagcaccaactagt
tcgaatcatcaatctcttcctcttactactaaaccatctaaatcaagacccgttccttct
tcctttaaaccatctaaaggtaatcctacgacatctaatgtacctaaatcaacgggaaca
tctagtgttccaaaaccatcagttatagatccagtagaacctaaacctcaaacagctcct
tcgaaacccaaacgaggtaaaagagccatcgatcaagcctcccaaagtaaacccataaca
gatccttcaggatccaataatcctaaaccgattccgatgaagatcgtctcaagacccaaa
gaaatcttgctcaaacctagtggatcaggctcggtacctgtctcaactgaaagttttaag
acttcaaaagtaggaaaccaagaagttaatcttcatcaacccaatccaaacttatctcaa
gaaggaaaacctagtagtaagaaaccgtatcccaaaggatcttcatcaacttcacgaccg
aacccttctaaacgaaaccaaccgtctaccccaacacttggtacgagtacaccacccacc
gaaactcgttctacaaacgagacgaaaagtgctgcgactagtactactaatcctagagct
aggggaactgaagaatcggctggggctagaagaaggttggggatggctttagctgggata
ggaggaactaatgaacggaaaagttctagaaaagacacacctaagaatgtacctaatcct
tga
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