KEGG   Melampsora larici-populina: MELLADRAFT_78386
Entry
MELLADRAFT_78386  CDS       T03138                                 
Name
(RefSeq) hypothetical protein
  KO
K14328  regulator of nonsense transcripts 3
Organism
mlr  Melampsora larici-populina
Pathway
mlr03013  Nucleocytoplasmic transport
mlr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mlr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    MELLADRAFT_78386
   03015 mRNA surveillance pathway
    MELLADRAFT_78386
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mlr03019]
    MELLADRAFT_78386
Messenger RNA biogenesis [BR:mlr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     MELLADRAFT_78386
   mRNA cycle factors
    P-body specific factors
     MELLADRAFT_78386
SSDB
Motif
Pfam: Smg4_UPF3
Other DBs
NCBI-GeneID: 18933101
NCBI-ProteinID: XP_007412681
JGI: Mellp1_78386
UniProt: F4RTQ9
LinkDB
Position
Unknown
AA seq 460 aa
MTERNKVVIRHLPPALPEEVFWKTLSPWIDPINESTPAKCLVTYKSFIPGKLRQNKGKID
LPSRAYLYFSSVEDLVEFHHGYAQQAFRDSRGNITVPKIEFAPFQKIPTQVKKLDPRCGT
IDSSQDYQLFLKKLESPLNQETEDDSNQSNLTEDSTKLEIPKITPLIQHLRSLRKSAQEA
TTAQKLQQRNTTTTSASKVSSIKDPHDLPPHQLIKRAPTSSNHQSLPLTTKPSKSRPVPS
SFKPSKGNPTTSNVPKSTGTSSVPKPSVIDPVEPKPQTAPSKPKRGKRAIDQASQSKPIT
DPSGSNNPKPIPMKIVSRPKEILLKPSGSGSVPVSTESFKTSKVGNQEVNLHQPNPNLSQ
EGKPSSKKPYPKGSSSTSRPNPSKRNQPSTPTLGTSTPPTETRSTNETKSAATSTTNPRA
RGTEESAGARRRLGMALAGIGGTNERKSSRKDTPKNVPNP
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgacagaaagaaacaaagtagtcattcgacatttaccaccagctttacccgaagaagta
ttctggaaaactctttcaccttggatcgatcctatcaacgaatctacacctgctaaatgt
ttagttacttataaatcgtttattcctggtaaactaagacaaaataaaggaaaaatcgat
ttaccttcaagagcttatctttatttttcaagtgttgaagatttagttgaatttcatcat
ggttatgctcaacaagcttttcgtgatagtagaggtaatattactgtacctaaaatcgaa
ttcgcaccatttcaaaagattccaacccaagtcaaaaaactagatccacgttgtggaacc
attgattcttctcaagattatcaactttttcttaaaaaacttgaatcacctttaaatcaa
gaaacagaagatgattcaaaccaatccaatctaactgaagattcaaccaaactagaaatt
cccaaaatcacacccttaatccaacacttacgatcactaagaaaatcagcacaagaagcc
acaacggctcaaaaactacaacaacgcaatacaactactacttcagcttccaaagtttct
tctattaaagacccacacgatttacctcctcatcagcttatcaaacgagcaccaactagt
tcgaatcatcaatctcttcctcttactactaaaccatctaaatcaagacccgttccttct
tcctttaaaccatctaaaggtaatcctacgacatctaatgtacctaaatcaacgggaaca
tctagtgttccaaaaccatcagttatagatccagtagaacctaaacctcaaacagctcct
tcgaaacccaaacgaggtaaaagagccatcgatcaagcctcccaaagtaaacccataaca
gatccttcaggatccaataatcctaaaccgattccgatgaagatcgtctcaagacccaaa
gaaatcttgctcaaacctagtggatcaggctcggtacctgtctcaactgaaagttttaag
acttcaaaagtaggaaaccaagaagttaatcttcatcaacccaatccaaacttatctcaa
gaaggaaaacctagtagtaagaaaccgtatcccaaaggatcttcatcaacttcacgaccg
aacccttctaaacgaaaccaaccgtctaccccaacacttggtacgagtacaccacccacc
gaaactcgttctacaaacgagacgaaaagtgctgcgactagtactactaatcctagagct
aggggaactgaagaatcggctggggctagaagaaggttggggatggctttagctgggata
ggaggaactaatgaacggaaaagttctagaaaagacacacctaagaatgtacctaatcct
tga

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