Methanosarcina lacustris: MSLAZ_1945
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Entry
MSLAZ_1945 CDS
T03822
Name
(GenBank) DNA double-strand break repair Rad50 ATPase
Organism
mls
Methanosarcina lacustris
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_27
AAA_23
SMC_N
AAA_29
DUF948
Motif
Other DBs
NCBI-ProteinID:
AKB75206
UniProt:
A0A0E3S4P4
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Position
2531085..2534951
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AA seq
1288 aa
AA seq
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MEINAIHIDGFGKFSRLSIEDLPSGLVIFTGANEAGKSTLFTFIRRMFFGIPNTRCNLYP
PLEGGKHGGRLAVIDSAGDRWVIERNAGRKDDAKVVLPDGNAGGRAELLKLLGHADRNVF
ENIYAFGLEELQSFETLNNQSINSKLYSAGTGVGVSISGLMDSISSSENNLYKPRGSKPL
INELFREIGKTEEKIAEFEGAQKKYDSLHFELEQRTGDIDQLKEKSLNIRNKLNHIQNLL
SVWEDWRALQESKTALEGLPGLESFPEKGEEKLTRLREKIEEIKETISRLEQELEKNAVK
ERSLSPDESLLGQKDAVLELESGLGKYRSEVKNLPSLEINLSQEEAGLSELLMELGPKWN
EEALDHFDRSIPAKETVIQMRRSVKEIEDQIKETGNELQQILNSIERVSQENDSFEESLL
VHRTQVIELGNGIEKYRTDKDLLHSETREVQDRKAELKENLSGLGEGWDESTLARFERST
PSKETVIGKRREMEEAEKTIERYRDRLELALGEIKEVRGEIEALEEKLEAYSKLPNPEEV
KQGLEAVSYLRVNHPLLREKESEFKNLEKDLEKEEMLFAAFGPRKTEYEGGLPLWPAGML
LIAGGIGLVYEYMNNSLLSGLGIFILLFATSAAYFLKARKKPSNPPVGEEQLKGTEARKQ
KAQDSKEKLSGEIASLKEYMKTRAKKCGFEDIPDPSVREQKADELQRVLLDLKTAGELHQ
GKEKLQKKRDKLNAAYQELEGKLKVGESRQEEVLQEWKEWLVSSGFKPELSPEHVLELLS
GIRACLENQKNVKELEKQVHLREAAIKKYEEEALGVLGACERPVLGIALESEIAKLREDV
SFASNQAERMRILEVESEDLNRKKEELKARLLEERTQRDTLSEKWTLWLGAYGLDPSLSV
ESVLEIFSVIRTCFDRQRAIRKLEEQIASSRTSIEAYEAKVTGVLQECGRPFSGLSFDTR
IEKLRLDLEQASEETRSLQQLKTRSKELDIELQAARDKYEDAAKELAVLLESGSAATEEV
FCENARLRTQRTELERGEREAEQQILRISGDGEKYDIFIEELQASDPLGLEEENRRLEEG
LKTLEQETTENMDRRGAIGNQIEQLEHGSEGSLARVMQESLLEGLHEKSREWASLVLARK
VLAKAIEVYEKERQPAVIVESQAFFSKITGGRYTRIYSPLNSSEIYVEDREGHHKSVPEL
SRGTAEQLYLSLRFGFIREFGRHSESLPVVFDDVLVNFDPERCKNTCEAIKDLVSGNQVF
YFTCHPETVQMLVERFPEARAVDLEKVA
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggaaattaatgccattcatatcgacggtttcggcaagttttccaggctgtctattgaa
gacctgccctccggcctggtcattttcacaggggcaaatgaggcaggaaagtcaacatta
tttacttttatccggaggatgttttttggaatccctaacacaaggtgcaacctctatcct
ccacttgaaggagggaagcatgggggaaggcttgcagtcatcgattccgccggagaccgt
tgggtcatagagagaaacgcaggccgaaaagacgatgcaaaagttgtgcttccggatggg
aatgcaggaggcagggctgaacttcttaaacttctgggccacgctgacaggaacgtcttt
gaaaatatctatgcttttggccttgaagaactgcagagttttgagaccctgaacaaccag
agcatcaatagtaaactctacagtgcaggcacgggagtcggagtttccatttcaggactg
atggattccatcagcagcagtgaaaacaatctgtataaacccagaggtagcaaacccctt
ataaatgagctattcagggaaataggaaaaactgaagaaaaaattgccgaatttgaagga
gcccagaaaaaatacgattctcttcatttcgaattggaacaacgaaccggagacattgat
cagttaaaagaaaagtctctgaatatacgaaacaaattaaaccacattcaaaacctgctt
tcggtctgggaagactggagagccctgcaggaatcaaaaactgcccttgaaggtttaccc
gggcttgagagtttccccgaaaaaggggaagaaaagcttacaaggctccgggaaaaaatt
gaagaaataaaggagaccatttcgaggctggagcaggaactggaaaaaaatgccgttaaa
gaacgaagcctttctccggacgaaagccttctcggacagaaagatgcagtgctggaactg
gaaagcgggcttgggaagtacaggtccgaagtaaaaaatctcccgtccctggaaataaac
ctcagccaggaagaagccgggctttctgagctcctcatggaactcggcccgaaatggaat
gaggaagctctggaccactttgatcgctcaatcccggcaaaagaaaccgtcatccagatg
cgaaggtcagtaaaggaaattgaagatcaaataaaagagactggaaatgaactccaacag
attttaaacagcatcgagcgagtcagtcaggaaaatgattcatttgaagaaagcctcctg
gtgcacagaacccaggtcatcgaacttggaaatgggatcgagaaataccggactgataag
gacctccttcattccgaaactcgggaagttcaggaccgaaaagccgaactgaaggaaaac
ctgtcagggcttggagaaggctgggacgaaagcacccttgcccgtttcgagcgttcaact
ccttcaaaagaaaccgtgattggaaaacgaagggaaatggaggaggcggaaaaaacaatc
gagaggtaccgcgacaggctcgaacttgcccttggggaaatcaaagaagtccgcggggaa
atagaagccctggaagagaaactcgaagcctactcaaagcttcccaaccctgaagaggta
aagcaggggcttgaagctgtaagctacctcagggtgaatcaccctctcctcagggaaaag
gaaagcgaattcaaaaacctggaaaaagacctggaaaaagaagagatgctttttgcagcc
ttcgggccccggaaaaccgagtatgagggaggacttcccctctggcctgcaggaatgctc
ctgattgcaggtggcataggcctggtttacgagtacatgaacaactccctgctttccgga
cttggcatatttatcctcctttttgcgacttctgccgcatacttcctgaaagccagaaaa
aaaccctcaaaccctcctgtcggggaggaacaattgaaaggaaccgaagcccggaaacag
aaagcacaggactcaaaagaaaaactgtccggagagatcgcctccctgaaagaatacatg
aaaacccgggcaaaaaagtgcggctttgaagacattcccgacccctcggtgagggaacag
aaagccgatgaactgcaaagggtcctgcttgatttgaaaactgccggagaactgcaccag
gggaaggagaagcttcagaagaagcgggataagttaaatgcagcttatcaggagcttgaa
ggtaagctgaaggtcggagagagcaggcaggaggaagttctccaggaatggaaagagtgg
cttgtttcttcaggattcaaaccggagttatcccctgaacatgtgcttgagcttctttcc
gggatcagggcctgcctggaaaatcaaaaaaatgttaaagaactggaaaaacaggtacat
ctcagggaagctgcgattaaaaagtacgaagaagaagcccttggcgttctgggagcctgt
gaaaggcctgttttgggaattgcactcgaaagtgaaatcgcaaaactcagggaggatgta
agttttgcatctaatcaggctgaaagaatgaggatactcgaagttgagtccgaagacctt
aatcgtaaaaaagaagagctgaaagcccggctccttgaggaaagaacgcaaagggatacc
ctctccgaaaagtggactctctggcttggggcctatgggcttgacccatcactttcagta
gaaagcgtgcttgaaatcttttcggtaatccgaacatgctttgacaggcagcgggcgatc
cggaaacttgaagaacagatagcttccagcagaacttcgatagaagcctatgaagcaaag
gtaaccggggtcctgcaggaatgtggacgtccgttttccggactttcttttgacacccgg
attgaaaaactccgtttggaccttgaacaggcatctgaggaaacaaggagcctgcagcaa
ctgaaaacaagatcaaaagaactcgatatcgaacttcaggcagcccgggataagtatgaa
gacgctgcaaaagagcttgcagtccttcttgaatccggttctgcagcaacggaagaagtg
ttctgtgaaaatgcacggctccggactcagcgaacagagctcgaaagaggggaaagggag
gctgaacagcagattctgaggatttccggggatggggaaaagtatgatatttttatcgaa
gaacttcaagcctccgatccattgggcctggaagaagaaaaccgcaggctggaggaaggc
ctgaaaacccttgaacaggagaccaccgagaatatggacaggcgcggagcgataggaaac
cagatcgaacagctcgaacacggaagtgaaggttcccttgcaagggtaatgcaggaaagc
ctgctcgaagggcttcacgaaaagtcaagggaatgggcttccctggttctggcccgaaaa
gtccttgctaaagcaatcgaagtctatgaaaaggaaaggcagcctgcagttatcgtggaa
tcccaggcctttttctcaaagattaccggaggcaggtatacgaggatttattccccgctc
aactcttctgaaatctacgttgaagaccgggaagggcatcataagagcgtcccggaactc
agccggggaactgccgaacagctttatctctccctgcgtttcggttttatcagggaattc
gggaggcattcggaatctcttcctgtcgtttttgatgacgtgttggtgaactttgaccct
gaacgctgcaaaaacacctgtgaagccataaaggaccttgtttcaggcaaccaggtcttt
tatttcacctgccatcccgaaaccgtgcagatgcttgtagaaaggttccccgaagcccgg
gctgtagacctcgagaaagtagcataa
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