Mirounga leonina (Southern elephant seal): 117998257
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Entry
117998257 CDS
T07472
Symbol
SHANK1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
117998257 (SHANK1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_5
SH3_2
SAM_2
PDZ_6
PDZ
SH3_1
SH3_9
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
117998257
NCBI-ProteinID:
XP_034842856
LinkDB
All DBs
Position
Unknown
AA seq
2165 aa
AA seq
DB search
MTHSPASSEDEERHSASECPEGGSESDSSPDGPSRGPRGTRGQGSGAPGSLASTRGLQGR
SMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGLF
QPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGL
KKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAHI
DFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELL
LYNRAQLGIADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNKE
TCARILLYRGANKDVKNNNGQTPFQVAVIAGNFELGELIRNHREQDVVPFQESPKYAARR
RGPPGVGLTVPPALLRANSDTSMALPDWMVFAAPGTSSSGAPGPTSGPQGQSQPSAPSTK
LSSGTLRSASSPRGARARSPSRGRHPEEAKRQPRGRPSSSGTPREGPAGGTGGSGGPGGS
LGSRGRRRKLYSAVPGRSFMAVKSYQAQAEGEISLSKGEKIKVLSIGEGGFWEGQVKGRI
GWFPSDCLEEVANRSQEGKQESRSDKAKRLFRHYTVGSYDSFDAPSLMDGIGPGSDYIIK
EKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGD
FLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEAVHKKAPQQAKRLPPP
AISLRSKSMTSELEEMEYEQQPAPVPSMEKKRTVYQMALNKLDEILAAAQQTISASESPG
PGGLASLGKHRPKGFFATESSFDPHHRSQPSYERPSYLPPGPGLMIRQKSIGAAEDDRPY
LAPPAMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPPAPSSSGRLTPSPRGGHFNPSSGG
PLPSSSPASFDGPSPPDARVGGREKSLYHSGPLPPAHHHPPHHHHHHAPPPQPHHHHAHP
PHPPEMETGGSPDDPPPRLALGPQPSLRGWRGGGPSPTPGAPSPSHHGSGGGGIGSSQAP
ALRYFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVEGEPQKGGGLPPAPSPTSPASPQP
PPAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPEAAGGGGGGGGPSAPSP
APAMSPVPPSPSPVPTPTPTSPSGPATLDFTSQFGAALVGAARREGGWQNEARRRSTLFL
STDAGDEDGGDSGLGPGAPPGPRLRHSKSIDEGMFSAEPYLRLESAGAGGGGGYAAYAAG
SRAYAGGGASSAFTSFLPPRPLVHPLTGKALDPASPLGLALAARERALKESSEGGGPPQP
PPRPPSPRYEAPPPTPHHHSPHAHHEPVLRLWGASPPDPARRELGYRAGLGSQEKSLPAS
PPAARRSLLHRLPPTAPGVGPLLLQLGPEPPPPQPGVSKAWRPGAPEEPERLPLHVRFLE
NCQPRASGAGGRGPPSEDGPGVPPPSPRRSVPPSPTSPRGAEENGLPLLVLPPPAPSVDV
EDGEFLFVEPLPPPLEFSNSFEKPESPLTPGPPHALPDPPSPATPLPPGPPPAITAAPPT
LDSTASSLTSYDSEVATLTQGAPVAPGDAPPPGPPAPAAPAAPAPQPGPDPPPGTDSGIE
EVDSRSSSDHPLETISSASTLSSLSAEGGGSAGGGGGGGGASVASGPELLDTYVAYLDGQ
AFGGSGTPGPPYPPQLMTPSKLRGRALGTSGGLRPGPSGGLRDPVTPTSPTVSVTGAGTD
GLLALSGCTGPSAAAMAGGPVALEPEGPPVPLPSASSLPRKLLPWEEGPGPPPPPLPGPL
APPQASALATVKASIISELSSKLQQFGGSSAAGGALPWARGGSGGSGDSHHGGASYVPER
TASLQRQRLSEDSQSSLLSKPVSSLFQNWPKPPLPPLPTGSGVPPSAAAAPGATSPSASS
STSTRHLQGVEFEMRPPLLRRAPSPSLLPASEHKVSPAPRPSSLPILPSGPLYPGLFDIR
SSPTGGAGGSADPFAPVFVPPHPGISGGLGGALSGASRSLSPTRLLSLPPDKPFGAKPLG
FWTKFDVADWLEWLGLAEHRAQFLDHEIDGSHLPALTKEDYVDLGVTRVGHRMNIDRALR
FFLER
NT seq
6498 nt
NT seq
+upstream
nt +downstream
nt
atgacccacagccccgcgtcaagcgaggacgaggaacgccacagtgccagcgagtgtccc
gaggggggctcagagtccgacagctccccagacgggcccagcagaggcccccgggggacc
cggggccagggcagcggagcacctggtagtctggcctccacccgaggcctccagggccgc
tccatgtctgtcccggacgacgcccacttcagcatgatggtcttcaggattggcatcccg
gacctgcaccagacaaaatgtctgcggttcaaccctgatgccaccatctggacagccaag
cagcaggtgctctgcgccctgagcgagagcctgcaggacgtgctcaactacggtctgttc
cagccggccacctcaggccgcgatgccaactttctggaggaggaacggctacttcgggag
tacccccagtcttttgagaagggggtgccctacctggagttccgatacaagacccgggtt
tacaaacagaccaacctggatgagaagcagctggccaaattgcacacgaagacggggttg
aagaagttcctggagtacgtgcagctcgggacgtccgacaaggtggcacggctgctggac
aaggggctggaccccaattatcatgactcggattcaggagagacccccctgactctggct
gcccagacggaaggctctgtagaggtgattcgaaccctgtgcctgggaggggcccacatc
gacttccgggcccgggatggcatgacagcgctgcacaaagctgcgtgtgcccgtcactgc
ctcgctctcacggcactcctggaccttgggggctcccccaactacaaggaccgccgaggc
ctgacccctctgttccatacggcgatggtggggggcgacccccgctgctgtgagctcctc
ctgtacaacagggcccagctgggcatagctgatgagaatggctggcaggagattcaccag
gcctgccagcggggtcactctcagcacctggaacacctgctcttctacggggctgagccc
ggagcccagaacgcctcggggaacacggccttgcacatctgcgccctctacaataaggag
acctgcgctcggatcctcctctatcgaggagccaacaaggatgtgaagaataacaatgga
cagacccccttccaggtggcagtgatcgctgggaattttgaattgggggagctgatccga
aaccaccgagaacaggatgtggtgcccttccaggagtcccccaagtacgcagcccggcga
cggggaccccccggcgtagggctgacggtgcccccggcactgcttcgggccaacagtgat
accagcatggccctgcccgactggatggtgtttgcagccccggggacctcgtcctctggg
gcccctggccctacctccgggccccagggccagtcgcagccctcggcccccagcaccaag
ctcagcagtgggaccctccgaagtgccagcagcccccggggcgcccgggcccgctcccca
tcccgtgggaggcaccctgaagaggccaagaggcagccccgtggacggcccagctccagt
gggacgcccagggaagggccggcagggggcacagggggctcagggggccctgggggctcc
ctgggcagccgcgggaggcgcaggaagctctactcagcagtacccggacgctccttcatg
gccgtgaagtcctaccaggcccaagccgagggggagatctccctgagcaagggggagaag
atcaaagtgcttagcatcggggaaggaggcttctgggaaggccaggtcaaaggtcgcatt
ggctggttcccctctgactgcctagaagaggtggcgaaccgctcccaggagggaaagcaa
gaaagccgcagtgacaaggcaaagagactcttccggcattataccgtgggctcctacgac
agctttgatgccccaagcttgatggatgggattggcccagggagcgattacatcattaag
gagaagacagtcttgctgcagaagaaggacagtgaggggtttgggttcgtgctccggggg
gccaaggcgcagacccccatcgaggagttcacccccaccccggccttcccggcactgcag
tatctggagtctgtggatgagggtggcgtggcatggcgagctggacttcgtatgggagac
ttcctcatcgaggtgaacgggcagaatgtggtgaaggttggccaccggcaggtggtgaac
atgatccgccaagggggcaacacgctgatggtcaaggtggtgatggtcaccaggcacccg
gacatggatgaggctgtccataagaaagcaccccagcaggctaagcggctcccgccccca
gccatctctctgcgttccaagtctatgacctcagagctggaggagatggagtatgagcag
cagcccgcgccggtgcccagcatggagaaaaagcggaccgtgtatcagatggctctcaac
aaactggatgaaattttggcggcagctcagcagaccatcagtgcaagcgagagtcctgga
cctggtggccttgcatcgctgggcaaacaccggcccaaaggcttctttgccactgagtca
agcttcgatccgcaccaccgctcgcagccaagttatgaacgtccttcttacctgcctcca
ggacctgggcttatgatccggcaaaaatctattggggctgcagaagatgatagaccctac
ctagcacccccagccatgaagttcagccgcagcctgtctgtgcctggctcggaggacatc
cccccgccgcccaccacgtccccaccggagcccccctacagcacacctccagccccctcc
tcctctggccgcctcaccccatcccccagaggagggcacttcaaccccagttcgggtggc
ccgctcccctcctcttcccccgcatcctttgatggaccctcccctcccgacgcgcgtgta
gggggccgtgagaagagcctgtaccacagcgggcccctgccccccgcccaccaccacccg
ccccaccaccaccaccatcacgccccgcccccccagcctcaccaccaccacgcccacccc
cctcatcccccggagatggagaccggcggctctcccgacgaccccccaccccgactggct
ctggggccccagcccagcctgcgcggctggcggggcggcgggcccagccccaccccgggc
gccccgtccccgtcgcaccacggcagcgggggcgggggcatcggctcctcccaggccccg
gccctgcgctacttccagctgcccccccgggcggccagcgcggccatgtacgtgccggcc
cgctcgggccgcgggcgcaaggggcccctggtcaagcagaccaaagtcgagggcgagccg
cagaagggcggcggcctcccgcccgccccgtcgcccacgtcgccggcgtcgccgcagccg
ccgccggccgccccgtcggagaagaactccatccccatccccaccatcatcatcaaggcc
ccgtccaccagtagcagcggccgcagcagccagggcagcagcaccgaggcggagcccccc
actcagcccgaggctgcgggcggcggcggcggcggcggcggcccctcggcgccgagcccc
gccccggccatgtccccggtgccgccgtcgccctcgcccgtgcccacccccacccccacc
tcgcccagcggcccggccaccctggatttcaccagccagttcggagcggccctggtgggg
gcggcccggagggaagggggctggcagaacgaagcccgccggcggtccacgctcttcctc
tccaccgacgcgggggacgaggatggcggcgacagcgggctgggcccaggggcgcccccg
ggtccccggctgcgccactcgaaatccatcgacgaaggcatgttctccgccgagccctac
ctgcggctggagtccgcgggcgcggggggcggcggcggctacgcggcttacgcggccggg
agccgcgcctacgcgggcggcggggccagcagcgccttcaccagcttcctgccgccgcga
cccctggtccacccgctgaccggcaaggccctggaccccgcctccccgctcgggctggcc
ctggccgcccgagagcgggcgctgaaggagtcctcggagggtggtgggcccccccagccc
cctccaaggcccccgtcgccccgctatgaggccccgccgcccaccccacaccaccactcg
ccccacgcccaccatgagccagtgctgcgtctctggggggcctcaccaccggaccccgcc
cgccgggagctggggtaccgggcggggctgggcagccaggagaagtcccttccggccagc
cctccagctgcccgacgctccttgctgcaccgcttgccccccacagctcccggggtcggg
cccctcctcctgcagctggggccagagcccccgccgccgcagcccggggtgagcaaggcg
tggaggccgggggcccccgaggagcccgagcggctgcccctacacgtgcggttccttgag
aactgccagcccagagccagtggggcggggggaaggggacccccctcggaggacgggccg
ggggttccgccgcccagcccacgccgctccgtgccgccctcgccgacctccccgcggggc
gctgaagagaatgggcttcccctgctagtcctgccgccccccgctccctcggtggatgtg
gaagacggggaattcctcttcgtggaaccgctgcccccgcccctggagttctccaacagc
ttcgagaagcccgagtcgccgctcacacctgggcctccgcacgcgctgccggacccgccg
agcccagccacccccttgccccccgggccaccacctgctattactgccgcacctcccacc
ctggactccacggcatccagcctgacttcctacgacagcgaggtggccacactgacccag
ggggcccccgtggctcctggggacgcccctccgccaggcccaccggccccggcggcccct
gctgccccggccccccagcctggcccagacccgccgccgggcacggactccggcatcgag
gaggtggacagtcggagcagcagcgaccaccccctggagaccatcagcagcgcatccaca
ctgagcagcctctccgccgagggcgggggcagcgcgggcgggggcggcgggggcgggggc
gccagtgtggccagtgggccagagctcctggacacgtacgtggcctacctggacggccag
gccttcgggggcagtgggactcccggcccaccctatcctccgcagctcatgactccttct
aagctccgcggccgggctctgggcaccagcggaggactgaggcccggccctagtggggga
ctccgggaccctgtcactcccaccagccccaccgtctcggtgacaggggctggaacggat
gggctgctggccctgagtggttgcacgggaccctcagcggcggctatggccgggggtccg
gtggctctcgagccggaaggcccgccagtgcccttgccatcggcctcctctctgcctcgg
aagctgctgccctgggaggagggcccgggccccccgccgccacccctgcccgggcccctg
gccccgcctcaggcctcagccttggccacagtaaaagccagcatcatcagtgaactcagc
tccaagcttcagcaatttgggggctcctcggcagctggtggcgctctgccctgggcccgg
ggaggcagcgggggaagcggggacagccaccacgggggagccagctacgtccctgagagg
accgcttccctgcagcggcagagactctctgaagactcccagtcctcgctcctctccaaa
cccgtcagcagcctgtttcagaactggcccaaaccacctctgccgccactccccacagga
agcggggtccccccttcagccgctgcagctccaggggccacctcaccctcagcctcctcc
tccacgtctacccgccacctccagggtgtggagttcgagatgcggccgcctctgctccgc
cgggcccccagcccctcactgctgcccgcctcagagcacaaggtcagccctgcgcccagg
ccctcgtccctgcccatcctgccttctggacccctgtatccgggcctctttgacatccgc
agctccccaactggaggggcaggaggctcagctgaccctttcgcccctgtctttgtgcca
ccacaccccgggatttccggggggcttggtggagccttgtcaggggcctcccgctccctc
tcaccaacccgcctgctttcgctgcccccggacaagcccttcggcgctaaacctctgggg
ttctggaccaagttcgacgtggctgattggctggagtggctgggcttggctgagcaccga
gcacagttcctggaccacgagatcgatggctcccatctgcccgccttgaccaaggaggat
tacgtcgatctgggtgtgaccagggtgggccaccgcatgaacatcgaccgggctctcaga
tttttcctggagaggtga
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