Mirounga leonina (Southern elephant seal): 118004633
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Entry
118004633 CDS
T07472
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03013
Nucleocytoplasmic transport
mlx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118004633 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
118004633 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlx03019
]
118004633 (THOC1)
03041 Spliceosome [BR:
mlx03041
]
118004633 (THOC1)
Messenger RNA biogenesis [BR:
mlx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
118004633 (THOC1)
Spliceosome [BR:
mlx03041
]
Complex C
Other components
EJC/TREX
118004633 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
118004633 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
HsdM_N
Motif
Other DBs
NCBI-GeneID:
118004633
NCBI-ProteinID:
XP_034851973
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLSTFSQLPGSENEKKCTLDQAFRGVLE
EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSDTKPTRIARKRTAPE
DFLGKGPNKKILMGNEELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMV
ENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFASKLGEQWKILAPYLEMKDSEIR
QIECDSEDMKMRAKQLLVAWQDQEGVHATPENLMNALNKSGLSDLAESLTNDNETNS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgacgccgccgctcttcagtttgcccgaagcgcggacgcggtttacgaagtct
accagagaggccctgaacaacaaaaatatcaagccattgttgagtaccttcagccaatta
cctggcagtgaaaatgaaaaaaaatgtacccttgatcaagctttcagaggtgttctagaa
gaagaaattataaatcactcatcatgtgaaaacgttttagctattatttctcttgctatt
gggggcgtaactgaaggtatttgtaccgcatctacaccttttgtattattgggagatgtt
ttggattgtcttcctttggatcaatgtgacacaatattcacttttgtggaaaaaaatgtt
gctacttggaaatcaaacacattctattctgctgggaaaaattatttactacgtatgtgc
aatgatctcttgagaagattatcaaaatcccagaatacagtcttctgtggacgaattcaa
ctctttttggccaggcttttccctttatctgagaaatcaggtcttaacttgcagagtcaa
tttaatctggaaaacgtcactgttttcaataccaatgagcaggaaagcaccctgggtcag
aagcacactgaggatagagaagaaggaatggatgtagaagaaggtgaaatgggagatgat
gaagctccaacaacttgctccattccgattgattacaacctgtatcgaaaattctggtca
cttcaggattacttcaggaaccctgtgcaatgctatgagaagatttcatggaaaactttt
cttaagtattctgaagaagttctagctgtttttaagagttataaattagatgacactcag
gcctccaggaaaaagatggaagaattaaaaacaggaggagaacatgtatattttgcaaaa
tttttaacaagtgaaaagttgatggatttacaactgagtgacagtaactttcgtcgacac
atcttgttgcagtatctcattttattccagtatcttaaggggcaggtcaaattcaaaagt
tcaaactatgttttaactgatgagcaatcactctggattgaagatactacaaaatcagtt
tatcaactactatctgaaaacccccccgatggagaaagattttcaaagatggtagagcat
atattaaacactgaagaaaactggaactcatggaaaaatgaaggctgcccaagttttgtg
aaagaaagaacatcagacaccaagccgacaagaatagctcgcaagagaacagcaccagag
gacttcctagggaaaggacccaacaaaaaaattctaatgggaaatgaggagttaacaagg
ctttggaatctctgtcctgataatatggaagcttgcaaatcagagacaagggaatacatg
ccaactttggaggaattctttgaggaagccattgaacaggcagaccctgaaaacatggtt
gaaaatgaatacaaggctgtgaacaattcaaattatggttggagagccctgagactgtta
gcacggagaagccctcacttcttccagccaaccaaccagcaatttaaaagtttgccagaa
tatcttgaaaacatggtaataaagctagcaaaggaattaccacctccttctgaagagata
aaaacaggtgaggatgaagatgaggaagataatgatgctttactgaaggaaaatgaaagc
cctgatgttcgccgagacaaacctgtaacaggggaacaaatagaggtgtttgccagtaaa
ctgggcgagcaatggaagatcttggctccctacttggaaatgaaagactcggaaattaga
caaattgagtgtgatagcgaagacatgaagatgagagctaagcagctactggtcgcctgg
caagatcaagagggagtacatgcaacacctgagaatctgatgaatgcactgaataagtcc
ggattaagtgaccttgcagaaagtctaactaatgacaatgagacaaatagttag
DBGET
integrated database retrieval system
