Mirounga leonina (Southern elephant seal): 118011183
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Entry
118011183 CDS
T07472
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03008
Ribosome biogenesis in eukaryotes
mlx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
118011183 (XRN2)
09123 Folding, sorting and degradation
03018 RNA degradation
118011183 (XRN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlx03021
]
118011183 (XRN2)
03019 Messenger RNA biogenesis [BR:
mlx03019
]
118011183 (XRN2)
03009 Ribosome biogenesis [BR:
mlx03009
]
118011183 (XRN2)
03016 Transfer RNA biogenesis [BR:
mlx03016
]
118011183 (XRN2)
Transcription machinery [BR:
mlx03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
118011183 (XRN2)
Messenger RNA biogenesis [BR:
mlx03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
118011183 (XRN2)
Ribosome biogenesis [BR:
mlx03009
]
Eukaryotic type
Pre-60S particles
RNases
118011183 (XRN2)
Transfer RNA biogenesis [BR:
mlx03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
118011183 (XRN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
118011183
NCBI-ProteinID:
XP_034861638
LinkDB
All DBs
Position
Unknown
AA seq
950 aa
AA seq
DB search
MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKVPVDASKPNPNDVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD
RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGE
FIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAI
DRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKE
KRKRMKRDQPAFSPGGILTPHALGSRNSPGSQVASNPRQAAYEMRMQNNSSPSISPNTSF
TSDGSPSPIGGIKRKAEDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQ
SYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMG
VFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRA
ALEEVYPDLTPEETKRNSLGGDVLFVGKHHPLHDFILELYQTGSTEPVDVPPELCHGIQG
KFSLDEEAVLPDQIVCSPVPMLRDLTQNTAISINFKDPQFAEDYIFKAVMLPGARKPAPV
LKPSDWEKSSNGRQWKPQLGFNRDRRPVHLDQAAFRTLGHVMPRGSGAGIYGNAAPPPAT
YQGNLYRPLLRGQAQIPKLMSNMRPQDSWRGPPPLFQQQRFDRGVGAEPLLPWNRMLQTQ
NAAFQPNQYQMLAGPGGYPPRRDDRGGRQGYPREGRKYPLPPPSGRYSWN
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcccggctttctttcgctggctcagccgcaaatacccgtccatcattgtcaac
tgcgtggaagagaagccaaaagaatgcaatggtgtaaaagttcctgttgatgccagtaaa
ccaaatccaaatgatgtggagtttgataatctgtatttggatatgaatggaatcatccat
ccttgtactcatcccgaagacaaaccagcaccaaaaaatgaggatgaaatgatggttgca
atttttgagtacattgacagacttttcaatattgtaagaccaagacgacttctctacatg
gcaatcgatggagtggcaccacgtgctaaaatgaaccagcagcgttccagaaggttcaga
gcatcaaaagaaggaatggaagcagcagtggagaagcagcgagtcagggaagaaatattg
gcaaaaggtggctttcttcctccagaagaaataaaagaaagatttgacagcaactgtatt
acaccaggaactgagttcatggacaatcttgctaaatgccttcgctattacatagctgat
cgtttaaataatgaccctgggtggaaaaacttgacagttattttatctgatgctagtgct
cctggtgaaggagaacataaaatcatggattatattagaagacaaagagcccaacctaac
catgacccaaacactcatcattgcttatgtggagcagatgctgatctcattatgctcggc
cttgctacacatgaacccaactttaccatcattagagaagaattcaaaccaaacaaaccc
aaaccatgtggactttgtaatcagtttggacatgaggtcaaggactgtgaaggtttgcca
agagaaaagaagggaaagcatgatgaacttgcagatagtcttccttgtgcagaaggagaa
tttatcttccttcgtcttaatgttcttcgtgagtatctggaaagagagctcaccatggcc
agcctgccgtttacatttgatgttgagaggagtattgatgactgggtcttcatgtgcttc
tttgtgggaaatgacttccttcctcacctgccatcattagaaattagggaaggtgcaatt
gaccgtttggttaacatatacaaaaatgtggtacacaaaactgggggttaccttacagaa
agtggttatgtcaatctgcaaagagtacagatgatcatgttagcagttggtgaagttgag
gatagcatttttaaaaagagaaaggatgatgaggacagttttagaagacgacagaaagaa
aaaagaaagagaatgaagagagatcaaccagctttctctcctggtggaatattaacccct
catgccttgggttcaagaaattcaccgggttctcaagtagccagtaatccgagacaagca
gcctatgaaatgaggatgcagaataactctagtccttcaatatctcctaatacgagtttc
acttctgatggctccccgtctccaataggaggaattaagcgaaaagcagaagacagtgac
agtgaacctgagccagaggataacgtcaggctatgggaagctggttggaagcagcggtac
tacaagaacaaatttgacgttgatgcagctgatgagaaattccgtcgtaaagttgtacag
tcttatgttgaggggctctgctgggttcttcgatattattaccagggctgtgcttcctgg
aagtggtattatccattccattatgcaccatttgcttcagactttgaaggtattgcagac
atgccatctgattttgagaagggcactaaaccatttaaaccattggaacaacttatggga
gtttttccagctgcaagtggtaactttctacctccatcatggcggaagctcatgagtgat
cccgattctagtataattgacttctaccctgaagattttgctattgatttgaatgggaag
aaatatgcatggcaaggtgttgctctgttgccttttgtggatgagcgaaggctgcgagct
gctctagaagaggtatacccagacctcactccagaagagactaaaagaaacagtcttgga
ggtgacgtcttatttgtggggaaacatcacccactccatgacttcattttagaactctac
cagacaggttccacagagccagtggatgtaccacctgaactatgtcatgggattcaagga
aagttttctttggatgaagaagctgttcttccagatcaaatagtgtgttctcctgtcccc
atgttacgggatctgacacagaacactgcaatcagtattaattttaaagacccacagttt
gctgaagactacatttttaaagctgtaatgcttccaggagcaagaaaaccagcaccagta
ctgaaacctagtgactgggaaaagtccagcaatggacggcagtggaagccccagcttggc
tttaatcgggaccggcggcctgtccacctggatcaggctgcattcaggactttgggccat
gttatgccaagaggctcaggggctggcatttacggcaatgctgcaccaccacctgcaact
taccaagggaacttatacaggccactgttgagaggacaagcccagattccaaaacttatg
tcaaatatgaggccacaggattcctggcggggtcctcctccccttttccagcagcaaaga
tttgacagaggcgttggggctgaacctctgctgccatggaaccggatgctccaaacccaa
aatgcagctttccagccaaaccagtaccagatgctagctggacctggcgggtatccaccc
agacgtgatgatcgtggagggagacagggatatcccagagaaggaaggaaataccctttg
ccaccaccctcaggaagatacagttggaattag
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