Mirounga leonina (Southern elephant seal): 118015957
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Entry
118015957 CDS
T07472
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1 isoform X1
KO
K14284
nuclear RNA export factor
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03008
Ribosome biogenesis in eukaryotes
mlx03013
Nucleocytoplasmic transport
mlx03015
mRNA surveillance pathway
mlx05014
Amyotrophic lateral sclerosis
mlx05164
Influenza A
mlx05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118015957 (NXF1)
03015 mRNA surveillance pathway
118015957 (NXF1)
03008 Ribosome biogenesis in eukaryotes
118015957 (NXF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
118015957 (NXF1)
05168 Herpes simplex virus 1 infection
118015957 (NXF1)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
118015957 (NXF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlx03019
]
118015957 (NXF1)
03009 Ribosome biogenesis [BR:
mlx03009
]
118015957 (NXF1)
Messenger RNA biogenesis [BR:
mlx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118015957 (NXF1)
mRNA cycle factors
Stress granule specific factors
118015957 (NXF1)
Ribosome biogenesis [BR:
mlx03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
118015957 (NXF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tap-RNA_bind
TAP_C
NTF2
LRR_4
LRR_8
LRR_9
Motif
Other DBs
NCBI-GeneID:
118015957
NCBI-ProteinID:
XP_034868951
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MADEGKSYNEHDDRVSFPQRRKKGRGPFRWKYGEGNRRSGRGGSGIRSSRLEEDDRDVAM
SDAQDVPRIRHNPYPSRPNRRGDSWHDRDRIHVTVRRDRTLPDRGGAGTSQDGTSRNWFK
ITIPYGRKYDKSWLLSVIQSKCNVPFTPIEFHYENTRAQFFVEDASTASALKAVNYKIVD
QENRRISIIINSSAPPHSVQNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQ
NIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSLVQKAPNLKILNLSGN
ELKSERELDKVKGLKLEELWLDGNPLCDTFRDQSTYISAIRERFPKLLRLDGHELPPPIA
FDVEAPTMLPPCKGSYFGTETLKNLVLHFLQQYYAVYDSGDRQRLLDAYHDGACCSLSIP
FTPQNPARSNLAEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPRTQHDVNSFVV
DISAQTSTLLCFSVNGVFKEVDGKARDSLRAFTRTFVAVPASNSGLCIVNDELFVRNASP
DEIQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQ
AFTHLKAKGEIPEVAFMK
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggggaagtcctacaacgagcacgatgaccgtgttagtttccctcaaaga
agaaagaaaggccggggtcctttccggtggaaatatggtgaggggaaccgtaggtctgga
agaggaggttctggcatccggtcttcccgcctggaggaagatgacagagatgtggcgatg
agtgatgcccaggatgttccccgaatacgacacaacccctatccttcccgacccaaccgt
cgaggtgacagttggcatgatcgagatcgcattcatgttactgtgcggagagacagaact
cttccagacagaggaggggctggtaccagtcaggatgggacctcgagaaactggtttaag
attacaattccctatggcagaaagtatgacaagtcatggctcctgagtgtgattcagagc
aagtgcaatgtccctttcacccccattgagtttcactatgaaaacacacgggcccagttt
ttcgtggaggatgccagcaccgcctctgcgttgaaggccgtcaactataagattgtagat
caggaaaaccgaaggatatccatcatcatcaactcctctgccccaccccattcggtacag
aacgaactgaagccggaacaagtcgagcagctaaagctgatcatgagcaaacgatatgat
ggctcccaacaagcgcttgacctcaaaggcctccgttcagacccagacttggtggctcag
aacatcgatgtcgtcctgaatcgcaggagctgtatggcggctaccctgcgaatcattgag
gagaacatccctgagcttttgtccttaaacttgagcaacaacaggctatacaggctggat
gacatgtccagccttgtgcagaaagcacccaacctgaagatcctcaacctctccggaaat
gagttgaagtctgagagggagttggacaaggtaaaagggctgaagctggaagagttgtgg
cttgacggaaacccgctatgcgacaccttccgagaccagtccacctacatcagcgccatt
cgagaacgatttcccaaattattacgcctggacggccatgagttacctccgccgattgcg
tttgatgttgaagcccccacgatgttacctccctgcaagggaagctactttggaacggag
accctgaagaatctggtcctgcacttcctgcagcagtactatgcggtgtacgactctgga
gaccggcagcggctcctggacgcctaccacgacggggcctgctgctccctcagcattccc
ttcacgccccagaaccctgcccgaagcaacctggccgagtacttcaaggatagcaggaat
gtgaagaagctcaaagacccgaccctgcggttccggctgctgaagcacacacgcctcaat
gtggtcgccttcctcaacgagctgcccagaacccagcacgacgtcaactcctttgtggtt
gacataagcgcgcagacaagtacgttgctgtgtttttctgtcaacggggtcttcaaagaa
gtggacggaaaggctcgggattctttgcgagccttcacccggacatttgtcgctgttcct
gcgagcaactcagggctgtgcatcgtgaacgacgagctgtttgtgcggaatgccagccct
gatgagatccagagagcctttgccatgcctgcacccaccccttcctccagtccagtgccc
accctgtccccagagcagcaggaaatgctgcaggcgttctctacccagtctggcatgaac
cttgagtggtcccagaagtgccttcaggacaacaactgggactacaccagatctgcccag
gcctttactcatctcaaggctaagggcgagatcccagaagtggcgtttatgaagtga
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