Microbacterium lushaniae: F6J85_04670
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Entry
F6J85_04670 CDS
T07230
Symbol
rfbD
Name
(GenBank) dTDP-4-dehydrorhamnose reductase
KO
K23987
dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:
5.1.3.13
1.1.1.133
]
Organism
mlz
Microbacterium lushaniae
Pathway
mlz00521
Streptomycin biosynthesis
mlz00523
Polyketide sugar unit biosynthesis
mlz00541
O-Antigen nucleotide sugar biosynthesis
mlz01100
Metabolic pathways
mlz01110
Biosynthesis of secondary metabolites
mlz01250
Biosynthesis of nucleotide sugars
Module
mlz_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
mlz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
F6J85_04670 (rfbD)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
F6J85_04670 (rfbD)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
F6J85_04670 (rfbD)
Enzymes [BR:
mlz01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
F6J85_04670 (rfbD)
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
F6J85_04670 (rfbD)
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Motif
Pfam:
RmlD_sub_bind
dTDP_sugar_isom
Epimerase
GDP_Man_Dehyd
NAD_binding_4
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
QEW02462
UniProt:
A0A5J6L243
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All DBs
Position
complement(1021101..1022519)
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AA seq
472 aa
AA seq
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MTVGIEFGKSLTATTTPIPGLVVYDLPVHGDARGWFKENWQREKMLAAGLPDFGPVQNNI
SFNDEVGTTRGIHAEPWDKYVSVATGRIFGAWVDLREGPTFGAVFTTELDPSRAIFVPRG
VGNSYQTLEPDTAYTYLVNDHWSPTAEYTFLNLADETAAIQWPIPLDQVQISDKDKNHPR
LADVTPMAPARMLITGANGQLGRALRAEFGDHPHIEYATREDLDLTAADLDAARRWRDYS
TIINAAAYTAVDKAETPEGRSEAWAANVTAVANLARIATANGITLVHVSSDYVFDGTKET
PYTEDDTVSPLGVYGQTKAAGDAIVSTVPRHFILRTSWVIGEGGNFVRTMAALAEKGVDP
RVVDDQIGRLTFTDDLARGILHLLTTRPAYGTYSLTASGDPESWAAIARRVFALTGHDPQ
RVTGVSTEEYFANAAAPVAPRPRNSVLDLSRIEATGFRPSAGAMALAAYLAR
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtggggatcgagttcggcaaatccctcaccgccaccaccaccccgatccccggc
ctggtcgtctacgatctgcccgtccacggcgacgcgcgcgggtggttcaaggagaactgg
cagcgcgagaagatgctcgccgccgggttgccggacttcgggccggtgcagaacaacatc
tccttcaacgacgaggtgggcaccacgcgcggcatccacgcggagccgtgggacaaatac
gtctccgtcgcgacgggccgcatcttcggcgcctgggtggatctgcgtgagggcccgacc
ttcggagcggtgttcacgaccgagctggatccgtcccgggcgatcttcgtcccccgcggc
gtcggcaactcctaccagacgctggagccggacaccgcgtacacgtatctcgtgaacgac
cactggtcgcccaccgccgaatacacattcctcaacctcgccgacgagacggcagccatc
cagtggcccatcccgctggatcaggtgcagatcagcgacaaggacaagaaccacccgcgt
ctcgccgacgtcacgcccatggcgcccgcgcggatgctgatcaccggcgccaacgggcaa
ctcgggcgcgcgctgcgggcggagttcggggaccacccgcacatcgagtacgccacgcgc
gaagacctcgacctgaccgccgccgacctggacgccgcgcgacgttggcgcgactactcc
acgatcatcaacgccgccgcgtacaccgccgtcgacaaggcggagacccccgagggccgc
tccgaggcgtgggctgcgaacgtcacagccgtggccaatctcgctcggatcgccacggcc
aacgggatcaccctcgtccacgtctccagcgactacgtcttcgacggcacgaaggagacc
ccctacaccgaggacgacacggtgtcgccgctcggtgtgtacgggcagaccaaggcggcc
ggcgacgcgatcgtctccaccgtgccccgccacttcatcctccgcaccagctgggtgatc
ggcgagggaggcaacttcgtgcggacgatggcggccctggccgagaagggcgtcgacccc
cgtgttgtcgacgaccagatcgggcgcctgacgttcaccgacgatctggcccgcggcatc
ctccacctcctcaccacgcgaccggcgtacggcacctacagcctgaccgcatccggcgat
ccggagtcgtgggccgcgatcgcgcgccgcgtcttcgcgctcaccggacacgacccccag
cgtgtgaccggcgtctccacggaggagtacttcgcaaatgccgctgcccccgtcgcccca
cgtccgcgcaacagcgtgctcgacctgagccggatcgaggcgacgggattccgtccctcg
gccggcgcgatggccctggccgcctacctcgcgcggtag
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