Methanosarcina mazei Go1: MM_2716
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Entry
MM_2716 CDS
T00082
Name
(GenBank) conserved protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mma
Methanosarcina mazei Go1
Pathway
mma03410
Base excision repair
mma03430
Mismatch repair
mma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MM_2716
03430 Mismatch repair
MM_2716
03440 Homologous recombination
MM_2716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mma03400
]
MM_2716
DNA repair and recombination proteins [BR:
mma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MM_2716
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MM_2716
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MM_2716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
AAM32412
UniProt:
Q8PTJ9
LinkDB
All DBs
Position
complement(3246133..3247122)
Genome browser
AA seq
329 aa
AA seq
DB search
MTDAQNQLKAKTLILTHGDSDGICSGALAKSAFPDAYVYFTSPVSLLEKLNLIEYVETLI
ICDIAIDERYCTELQSALGKFAEECNLYYIDHHPLPERCSKEEWFYHETEVCASELTYRV
FEDLLSSEMKRVAIYGAIGDFSDNTPCVKDWVKDWDKRSLYFQAGTLIQAILHKGKDYEF
KRTLLEPLSKNVIPSNIPDLLELAREAAINEEKIRFCVKKSVKVLKNSAYVVNTNNSISK
AAIYAASYGRREVGIAAEYREKKGAYDLSIRSRGEVDLNRILRSVAPSFGGSGGGHPVAA
GARIPKDSLESFLRAFDKKIGEAKEVKQK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgctcagaaccagctcaaagcaaaaaccctgatccttactcatggggactct
gacgggatatgttcgggagcacttgcaaaaagcgcttttcctgatgcatatgtatacttt
acaagccctgtcagccttcttgaaaaattaaatcttatagaatatgttgaaactctcatt
atctgcgatattgctattgatgaaaggtactgcactgaactccaatctgcacttgggaag
tttgcggaagaatgtaacctttattacattgaccaccacccacttccggaaaggtgcagt
aaagaagaatggttttaccatgaaacagaagtatgcgcttcagagctgacttatagagtt
tttgaagaccttctgagctcagagatgaaaagagttgcaatttacggggctataggggac
ttcagtgataacaccccctgtgtaaaggactgggtgaaagactgggacaaaagaagcctc
tatttccaggcagggaccctgatccaggcaatacttcataagggaaaagattatgaattc
aaaaggactctgcttgaacccctttcaaaaaatgtaatcccttcaaatatcccggatctg
ctcgaactcgcaagagaagctgcaattaacgaagaaaaaatccggttctgcgtaaaaaaa
agtgttaaagtcctcaaaaacagcgcgtatgttgtaaatacgaataactccatttcaaaa
gcagcaatctatgcagcttcctacggccggagggaggttggaattgcagcggaatacagg
gagaaaaagggagcgtatgacctgagtatacgttcccgcggagaagtagacctgaaccga
atccttcgctcagttgctcccagttttggagggagcggaggcgggcaccctgttgcggca
ggagcacgaataccgaaagattctctggaaagttttctccgggctttcgataaaaagatc
ggagaagcaaaagaggttaaacaaaaatga
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