Mucilaginibacter mali: HQ865_17260
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Entry
HQ865_17260 CDS
T07211
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mmab
Mucilaginibacter mali
Pathway
mmab03030
DNA replication
mmab03430
Mismatch repair
mmab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HQ865_17260 (dnaE)
03430 Mismatch repair
HQ865_17260 (dnaE)
03440 Homologous recombination
HQ865_17260 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmab03032
]
HQ865_17260 (dnaE)
03400 DNA repair and recombination proteins [BR:
mmab03400
]
HQ865_17260 (dnaE)
Enzymes [BR:
mmab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HQ865_17260 (dnaE)
DNA replication proteins [BR:
mmab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HQ865_17260 (dnaE)
DNA repair and recombination proteins [BR:
mmab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HQ865_17260 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
T2SSK
Motif
Other DBs
NCBI-ProteinID:
QKJ31440
UniProt:
A0A7D4UPY9
LinkDB
All DBs
Position
complement(4126176..4129766)
Genome browser
AA seq
1196 aa
AA seq
DB search
MPDFSHLHVHTQFSLLDGAADISKLYKKAATDGMKALAITDHGNMFGVFKFVAEAGKHNV
KPIVGCEFYVVEDRHKKQFTKENKDVRRHQLLLAKNAEGYKNLVKLCSLGYMEGLYSKWP
RIDKELILKYHKGLIATTCCIGASVPQAILRQGEEEGEKEFKWWLNLFGEDYYIELQRHE
IPEQTIINNALLKLAKKHNVKVICSNDSHYVDQQDSNAHDILLCVNTGDMQSTPIATDEE
GGKGYRFGFPNDQFYFKTQAEMGQLFHDLPESLDNTNEIVDKVDVLKLKRDIMLPNYPIP
PEFKIHDGAESDTLNQWEYLKHLTFTGAKERYIDISAEAEERINFELFTIRTMGFAGYFL
IVADFIKAGRDMGVFIGPGRGSAAGSVVAYCIGITNIDPIKYNLLFERFLNPDRKSMPDI
DTDFDDEGRQKVIDYVVDKYGKNQVAQIITYGSMAARTSIQDVGRVLDMPLSDVNQLKKL
VPDTLGINLKQAIEQVPELQEIYKSKDLKGVVLREAEKLEGSIRNTGVHAAGIIIAPDDL
TTIVPVATAKDSDLLVTQYDGRVIEDAGVIKMDFLGLKTLTIIKGALRMIKQNHGEDIDI
DALPLTDQLTFELYQRGDTNGTFQFESDGMQMYLRDLKPDKFEDLIAMNALYRPGPIEYI
PNFINRKHGREPITYDLPDMEEYLAESYGITVYQEQVMLLSQKLAGFSKGDADVLRKAMG
KKQIEVLNKMEAQFMDGAMAKGHPKDKLTKIWTDWKAFAQYAFNKSHSTCYALVAYQTAW
LKAHYPAEYMASVLNNQNSIDKISFFMEECRRMGVPVLGPDINESGNSFAVNKKGEVRFG
LSGVKGVGEKAVESIIEEREANGPYKTVYDFAQRSNVRTVNKKSYENLVYGGAFDAFNLH
RAQFFAKTENGILTGIERLIKYANDYQNTQSSSQSSLFGGGSDIASFIPEPAMPECEQWA
LIEKLKFEKDVIGIYLTGHPLDNYKLELVKYCNARVSDLKTMQKARSAEGGEDIMTAFAE
LRKKGELCIGGLMANVQHKTTKTGKPFGTFVLEDYNDSYEFALFGDDYIKFRNLLGEGFF
VQVRGNIEEKFRQKDNWDLRINTINLLSELRDRFTKSITVILDLHVLSSQLLESLEAMVQ
VNNDRYPNKNCTLRFQVRDREEALLVDLPSKTYKVNPSDDLLEDIQALTNMEAVLA
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatttctctcatttacacgtacatacacaattctccctgttagacggggcggcc
gatatttccaagctttacaaaaaagccgcgaccgatgggatgaaagcactggccattacc
gatcatggcaacatgttcggcgtgtttaaatttgtggccgaggcaggcaagcataatgta
aaacctattgtaggctgcgaattttacgtagtggaagaccgccataaaaagcagttcact
aaagagaataaggacgtgcgccgacaccagcttttgctggctaaaaacgccgaaggttat
aagaacctggtaaaactatgctcgcttggttatatggaaggcctttacagcaaatggccg
cgtattgataaggaactgatccttaaatatcacaaaggattgatcgctactacctgctgt
attggcgcttcggtgccgcaggctattttaaggcagggtgaagaagagggtgaaaaagag
tttaaatggtggctcaacctgttcggcgaggattactatatcgaactgcaacgccacgag
atacccgagcaaaccattattaacaatgcattgctcaaactggcaaaaaagcataatgtt
aaggtgatctgctctaacgattcgcactacgtggatcaacaggatagtaacgcgcacgat
attttgctgtgtgtgaataccggcgatatgcagagcacgcccatagcaaccgacgaagaa
ggcggcaagggctatcgcttcggcttcccgaacgaccagttttattttaaaacccaggcc
gagatggggcagctgtttcacgacctgcccgaatcattagataataccaacgagatagta
gataaggtagatgtgctgaagctgaagcgcgatatcatgctgcccaactatcccatcccg
cccgaatttaagatacacgacggtgccgagtcggacacgctgaaccagtgggagtacctg
aagcaccttacctttaccggtgccaaagaacgttatatcgatatcagcgccgaagccgag
gaacgtatcaacttcgagttgttcaccatccgtactatgggtttcgcgggttacttcctt
atcgtggccgactttattaaggccgggcgcgatatgggcgtattcattggtccgggccgt
ggttcggcagcgggatcggtggtggcctattgtatcggcatcaccaatatcgacccgata
aaatacaacctcctgttcgaaaggttcctgaacccagatcgtaaatcgatgcccgatatc
gatacagactttgatgacgagggccgccaaaaggtgatcgattacgtagttgacaaatac
ggcaagaaccaggtagcgcagatcattacctacggtagtatggccgcgcgcaccagtata
caggatgtgggccgtgtgctggatatgccgctgagcgatgtgaaccagttgaaaaagctg
gtacctgacacattgggtatcaacctgaaacaggcgatagaacaggtacccgaactacag
gagatctacaaaagcaaagacctgaaaggcgtagtactgcgcgaggccgaaaagctggaa
ggatctatacgtaataccggcgtacacgcggcgggcatcatcatcgcacccgatgacctg
accaccatcgtgcccgtagctaccgctaaagattcggacctgctggttacccagtatgat
ggccgtgtgatcgaggacgcgggcgttatcaagatggactttttgggtttaaagaccctt
accattattaaaggcgcgctgcgcatgatcaagcagaaccatggcgaggatattgatatt
gatgccttaccgcttaccgatcagcttacttttgaactttaccaacgcggcgataccaac
ggtacgttccagtttgaaagtgatggtatgcaaatgtacctgcgcgatttgaagcccgat
aaatttgaggaccttattgccatgaacgccctttaccgcccggggccgatagagtatatc
cctaactttattaaccgtaagcacggccgcgagccaattacttacgatttacccgacatg
gaagaatacctggcagaaagctatggtatcaccgtgtaccaggaacaggtgatgctcctc
tcgcaaaaattggccggctttagtaaaggcgatgccgacgttttgcgtaaggccatgggt
aaaaagcagatagaggtacttaataaaatggaagcccagtttatggacggtgctatggcc
aaaggccaccccaaagataaactgaccaaaatatggaccgactggaaagccttcgcgcaa
tatgcgttcaacaaatcgcactctacctgttacgcgctggtggcttaccaaaccgcctgg
ttaaaggcacattatcctgccgaatacatggcatcggtattgaataaccagaacagtatc
gataaaatttctttctttatggaagagtgccgccgcatgggcgtgccggtacttggcccg
gatattaacgagagcggtaactcgttcgccgtaaataaaaagggcgaggtacgtttcggg
ctttctggcgtaaagggtgtgggtgaaaaagcggtagaaagcattattgaagaacgcgaa
gccaatggcccgtataaaaccgtttatgattttgcccagcgcagcaatgtgcgtacggtc
aataaaaaatcgtacgaaaacctggtttatggcggagcctttgatgcttttaacctgcac
cgcgcgcaattcttcgctaagacggaaaacggtatcctgacaggtatcgaacgcctgatc
aaatatgctaacgattaccaaaatacgcaaagcagctcgcaatcatcgctgtttggtggc
gggagtgatattgcgtcgtttatccctgaacctgccatgccggagtgcgaacaatgggcg
ctgatagagaaactgaagtttgaaaaggatgtgatcggcatttaccttaccgggcacccg
ctggataactataagcttgaactggtaaaatattgtaacgcgcgtgtatccgacctgaag
accatgcaaaaagcccgctcggcagagggtggagaggacattatgaccgcctttgccgaa
ctacgcaaaaaaggcgaactgtgcattggcggcttgatggctaacgtacagcataaaacc
actaaaacgggtaagccattcggtacttttgtattggaggattataacgatagctacgaa
tttgcgctgtttggcgatgattatattaaattccgtaacctgctgggcgagggctttttt
gtgcaggtaagagggaatatcgaagagaagttccgccaaaaggataactgggacctgcgt
atcaacaccattaacctgctatccgaactgcgcgaccgctttaccaaatccatcaccgtg
atattggatctgcatgtgctaagcagccaactactggaaagtctggaagccatggtacag
gtaaataacgatcgttatcctaataaaaactgtacgctccgtttccaggtacgcgaccgt
gaggaagccctgttggttgatttgccatcaaaaacttacaaggtaaacccaagcgacgac
ctgttagaagatattcaggcgttgacgaatatggaggcggtactggcgtag
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