Mucilaginibacter mali: HQ865_20960
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Entry
HQ865_20960 CDS
T07211
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mmab
Mucilaginibacter mali
Pathway
mmab03410
Base excision repair
mmab03430
Mismatch repair
mmab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HQ865_20960 (recJ)
03430 Mismatch repair
HQ865_20960 (recJ)
03440 Homologous recombination
HQ865_20960 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmab03400
]
HQ865_20960 (recJ)
DNA repair and recombination proteins [BR:
mmab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HQ865_20960 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HQ865_20960 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HQ865_20960 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QKJ32129
UniProt:
A0A7D4QW48
LinkDB
All DBs
Position
complement(4960448..4962151)
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AA seq
567 aa
AA seq
DB search
MQKRWTIKQTDNEEKIKQLAAGLGIDSVLSTLLLNRGVQTFDEAKYFFRPLMEHLHDPFL
MADMEKAIDRIDRAIDNNEKILIYGDYDVDGTTSVALVYSFFHKRYKNLEYYIPDRYLEG
YGISTKGIDYAAQNDFKLIIALDCGIKSVDKIAYANTLDVDFIICDHHLPADELPAAVAL
LDPKRPQCDYPYKELSGCGIGFKLIQAYAQKHDIDFEEITCYLDLVAISIACDIVHITGE
NRVLAHYGLQQINTNPCIGVKALMSVAGKTVPYSISDIVFLIGPRINAAGRIDDAKHAVE
LLIACHEDDAKAKGILINIKNQERKEHDLTITGDALNMIDNDEILIGRKSTVVYNEGWHK
GVIGIVASRLTEKYYRPTIVLTRSNGHVAGSARSVRGFDLYEALCGCSDLLIQFGGHKYA
AGLTMMPENVDAFAQRFEEVVSATIPPELLIPEIPIDAELELKQIDPKFFRILQQFAPFG
PENMSPVFLTRSVYVKGQAGLVGGQHIKMTIDQPGSPMFDCIAFGQAEHLDNINNGLPFE
ICYSIEENVWREKRSIQLNIKGIRSPL
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaacgctggacaataaaacaaaccgataacgaagagaaaataaagcaactggct
gccggtttgggcattgatagcgttttaagcaccctgctgctaaaccgcggcgtgcaaact
tttgatgaagccaaatactttttccgcccgctgatggagcacctgcacgatccattcctg
atggcggatatggaaaaggccatcgacaggatagaccgtgccattgacaataacgaaaag
atcttgatctatggcgattatgatgtggatggcaccacatcggtagcgctggtgtacagc
tttttccataagcgctataaaaacctggagtattacattcccgaccgttacctggagggc
tacggcatatcaaccaaaggcatcgattacgccgctcaaaacgactttaagctgatcatc
gcgctggattgcggcattaaatcggttgataagatcgcgtacgcgaatactttggatgtt
gattttatcatctgcgatcaccacttgccggctgatgaattacccgcggctgtggccctg
ctggatcccaaacgcccgcaatgtgattatccttataaagaactttcgggttgtggtatt
ggctttaagctgatacaggcctacgcccaaaagcacgatatcgattttgaagagattacc
tgctatctcgatttggtggccatcagtatcgcctgcgatattgtacatatcaccggcgag
aaccgggtgctggcacattatgggctgcaacagatcaataccaacccctgcatcggcgtt
aaggcgctgatgagtgtggcagggaaaacggtgccctacagtatctctgatatcgttttt
ctgatcggtccgcgtattaatgctgccgggcgtattgatgatgccaaacacgctgttgaa
ctacttatcgcctgtcatgaagatgatgccaaggccaagggtatccttatcaatattaaa
aaccaggagcgcaaagagcacgatctgaccattaccggcgatgccctcaacatgatagat
aacgatgagatcctgatcggccggaaatctaccgtagtgtataacgagggttggcataaa
ggggttataggtatcgtcgcatcgcgcctgaccgagaaatattaccggccaaccattgtg
cttacccgatctaacgggcatgtggcgggttcggcacgttcggtacgcggcttcgatctg
tacgaggccctttgcggctgcagcgatctgctgatacagtttggtggccacaagtacgcg
gccggcttaaccatgatgcccgaaaacgtagatgcctttgcccaacgttttgaggaagtg
gtaagcgccaccatcccgcctgagttactgatacccgaaatacccatagatgctgaatta
gaattaaagcagatcgatccgaaatttttcaggatattgcagcagttcgcgcctttcggt
cccgagaatatgtcgccggtattcttaacccggagcgtttatgttaaagggcaggccggt
ttggttggcgggcagcatatcaaaatgactatcgaccaaccgggatcaccgatgtttgat
tgcattgcctttggccaggccgaacacctggacaacataaacaatggtttgccgtttgag
atatgctacagcatagaagaaaacgtatggcgcgaaaagcgcagcatacagttaaatata
aagggaataagaagccccctctaa
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