KEGG   Methanococcus maripaludis DSM 2067: MMJJ_00210
Entry
MMJJ_00210        CDS       T06430                                 
Name
(GenBank) Putative DNA ligase-like protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mmad  Methanococcus maripaludis DSM 2067
Pathway
mmad03030  DNA replication
mmad03410  Base excision repair
mmad03420  Nucleotide excision repair
mmad03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mmad00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MMJJ_00210
   03410 Base excision repair
    MMJJ_00210
   03420 Nucleotide excision repair
    MMJJ_00210
   03430 Mismatch repair
    MMJJ_00210
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mmad03032]
    MMJJ_00210
   03400 DNA repair and recombination proteins [BR:mmad03400]
    MMJJ_00210
Enzymes [BR:mmad01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     MMJJ_00210
    6.5.1.6  DNA ligase (ATP or NAD+)
     MMJJ_00210
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     MMJJ_00210
DNA replication proteins [BR:mmad03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MMJJ_00210
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     MMJJ_00210
DNA repair and recombination proteins [BR:mmad03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MMJJ_00210
   NER (nucleotide excision repair)
    Other NER factors
     MMJJ_00210
   MMR (mismatch excision repair)
    Other MMR factors
     MMJJ_00210
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase Arc_PepC L27_2
Other DBs
NCBI-ProteinID: AVB75440
UniProt: A0A2L1C8A0
LinkDB
Position
complement(20722..22443)
AA seq 573 aa
MLFSDFCKILDKIEKTTKRLEKTDYFVELIDFIKNNEKPENLKQVSQITIGRVFAEFENK
EIGIGPNLLLEAVKTTGISEKDLKSKIKETGDIGTAVENLSSNIKQVSLFSQALTLEEVY
STLKKLSEIEGNSSQKKKTRIISNLLILADPVESRYISRLILEDMRIGMNIPTILASFSN
YFNVNKESVEKIYAVTNDIGLLGEKLISGSNIEKDPELKLKVFRPIKPMLAQLTPSIEDA
MIETKMPQFETKYDGARVQVHKSNGGVKIYSRRLENITNSVPELVEEIKKLDIDNIILEG
ECVAMDLDSGKPRPFQDILRRFRRKYNIDKMAEKIALRIYFFDVLYYEKGLIDTPLKTRR
EILEKLFGTNNWDSELEKIKKEIFSNKMLFSSFKLNSDDPNLVKEFFNWSLSIGHEGIMI
KNPDAQYTPGSRVKTMYKVKPTLENLDVVVTRAKIGMGKRKDWYGSYELSVKDNDSNLHV
IGNVGSGLTEDDLEKLTKIVNEIKIEDLGEEVILEPKIVLEVTYEEIQTSEKYEMGYALR
FPRVVQIREDKSINDINTLDDVKKIYEIERNRK
NT seq 1722 nt   +upstreamnt  +downstreamnt
atgctttttagtgatttttgtaaaattcttgataaaattgaaaaaactacgaaaagactt
gaaaaaacagactattttgtagaattaatcgattttatcaaaaataatgaaaaaccggaa
aatttaaaacaagtgtcacaaatcacgattggaagggtttttgcagaatttgaaaacaaa
gaaattggaattgggccaaatttgttgcttgaagcagtaaaaaccacagggatatctgaa
aaagatttaaaatcaaaaattaaagaaaccggagacattggaactgctgttgaaaattta
agttcaaatataaaacaggtttcattgttcagccaagcacttacgcttgaagaggtgtac
tccacattaaaaaaactttcagaaatcgaaggaaattcctcacaaaaaaagaaaacaaga
ataatttcaaatttactaattttagcagaccctgttgaatcaagatacatttcaaggctt
attttagaagatatgcggattggaatgaacattccaacaattttagcctcattttcaaat
tattttaatgttaataaggaatctgtcgaaaaaatatatgctgttacaaacgatattgga
cttttgggcgaaaagttaatttctggctcaaacattgaaaaagatcccgaattaaaatta
aaagtattcaggccgataaaaccgatgcttgcacagctaaccccgtcaattgaagatgcg
atgattgagactaaaatgccccaatttgaaactaaatacgatggtgcaagagttcaagtg
cataaatcaaatggaggcgtaaaaatatacagcagaaggcttgaaaatattacaaattcg
gttcctgaactcgttgaagaaatcaaaaaactggatattgataatatcatattagaaggg
gaatgcgttgcaatggatttagattcgggaaaaccaagacctttccaagatattttaaga
aggttcaggcgaaaatataatattgataaaatggccgaaaaaatagctttaagaatatat
ttcttcgatgttttatactatgaaaaaggtttaatcgatactccgctaaaaacaagacgg
gaaattttagaaaaactatttggaacaaataactgggatagtgaactagaaaaaattaaa
aaagagatattttctaacaaaatgctattttcgtcgtttaaattaaatagtgatgatccc
aatcttgtaaaagaattttttaactggagtttaagcattggccatgaaggcatcatgatt
aaaaaccccgatgcacaatatactcccggaagccgtgttaaaactatgtataaagttaaa
ccaacgttagaaaatcttgatgttgttgtaacccgtgcaaaaattggaatgggaaaaaga
aaagactggtatggttcatatgaactctccgtaaaagataatgatagcaacttacacgtt
atcggaaacgttggaagcggacttaccgaagacgaccttgaaaaactcacaaaaatagtt
aatgaaataaaaatcgaagatttgggtgaagaagtaattttagaacctaaaatagtactc
gaagtaacttacgaagaaattcagacttctgaaaaatatgaaatgggttatgccttacgt
tttccaagagttgtccagataagggaagacaaatctataaatgacattaataccttagat
gatgtgaagaaaatatacgaaatagaacgaaacagaaaataa

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