Methylophaga marina: GCM100_14880
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Entry
GCM100_14880 CDS
T09183
Name
(GenBank) hypothetical protein
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
mmaf
Methylophaga marina
Pathway
mmaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GCM100_14880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmaf03400
]
GCM100_14880
Enzymes [BR:
mmaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GCM100_14880
DNA repair and recombination proteins [BR:
mmaf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GCM100_14880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
PriA_CRR
PriA_C
A2L_zn_ribbon
zinc-ribbons_6
TrwB_AAD_bind
LisH
AAA_22
PolC_DP2
YozD
Motif
Other DBs
NCBI-ProteinID:
BDZ73769
LinkDB
All DBs
Position
1439575..1440987
Genome browser
AA seq
470 aa
AA seq
DB search
MLEGITGSGKTEVYIELTERVLKDNQQVLILIPEIGLTSQFVDRFKKRLNTTIVILNSSV
SDKERKQAWLLAKAGLAHVIIGTRSAVFTPLSQPGLIIIDEEHDSSYKQQDGLRYHARNV
ALIRAQKYDIPIVMGSATPSLESLYQVKKQRFELLELTQRAGSAQLPKVRLVDCSQANPD
HGFSDILLKAIKKHLDAGNQVILFINRRGYAPVLMCHDCGWQAKCKHCDARMVVHQHRHI
LFCHHCGYIQRLVEECPECESSSLKSYGAGTEKIEQHLQQLFPETPVIRVDRDTTQRVNA
FSDLVADIKQGEARILVGTQMLAKGHDFHDVTLVGVLDTDQGLYSADFRATENLAQMITQ
VTGRAGRGEKSGEVIIQTEQPAHNFWKTLISNGYKKTAESLLQERIEMALPPASNWAVIR
AESADREEATAFLEAFSAQCHQQLAEDVLILGPVPAIMEKREDDSEHNYY
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
ttgctagaaggaataacaggaagtggtaagacggaagtctatattgaactcaccgaaagg
gtgttaaaggacaatcagcaagtattaatacttatcccagaaattggtctgacgagtcaa
tttgttgatcgattcaagaaaagattgaatacaaccattgtcatcttaaactcatccgtg
tctgataaagagagaaaacaagcctggctattagcaaaagcaggattagctcatgtcatt
attggtacacgctctgccgtttttactcctttaagccaacctggccttatcattattgac
gaagaacatgacagttcttacaagcaacaggatggtttgcgctatcacgccagaaatgtc
gcgttgattagagctcagaagtacgatattcctatcgtaatgggaagtgcgacgccttct
ctggaaagtttgtatcaagtaaaaaaacaacgctttgaacttctggaattaacacaacgt
gcaggaagtgctcaattacccaaagtacgtttagttgattgtagtcaggctaatcctgat
cacggttttagtgacatcctacttaaggcaataaaaaaacatcttgatgcgggcaatcaa
gtcattttgtttattaatcggcgtggttatgctcccgttttgatgtgtcacgactgtggc
tggcaagcaaaatgtaaacactgtgatgcaagaatggtggttcatcaacatcgtcatatt
ctgttttgtcatcactgtggctatattcagcgtttagttgaggaatgtcctgaatgtgaa
tccagctctcttaaaagttatggagctggtacagaaaaaatagagcagcatttacaacaa
ctttttcccgaaacgccggtgattagggtagatcgggataccacacaaagagtgaatgct
ttttctgacttagtcgctgatatcaaacagggagaagcgagaattttagtgggcacgcaa
atgctggcaaaaggtcatgacttccatgatgtgactttagtgggggtgcttgatacggat
caaggcctatatagtgcagacttcagagccacagaaaatctggcacaaatgattactcaa
gtcacaggaagggctggtagaggagaaaagtctggtgaagttattattcagactgaacag
cccgcacataatttctggaaaacattgatctccaatggatacaaaaaaacggcagaaagt
ctattacaagaacgaatagaaatggcattacctccagcatcaaactgggcggtcattcga
gctgagtctgctgatagagaagaagccaccgcttttttagaagcattcagcgcacagtgt
catcaacaactcgctgaggatgtcctcattttaggtcctgtccctgccattatggaaaaa
agggaggacgattcagagcacaattattattaa
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