Methylocaldum marinum: sS8_2728
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Entry
sS8_2728 CDS
T05638
Name
(GenBank) ribosomal large subunit pseudouridine synthase C
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
mmai
Methylocaldum marinum
Brite
KEGG Orthology (KO) [BR:
mmai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mmai03009
]
sS8_2728
Enzymes [BR:
mmai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
sS8_2728
Ribosome biogenesis [BR:
mmai03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
sS8_2728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
BBA34673
UniProt:
A0A250KSL2
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All DBs
Position
complement(2992459..2993409)
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AA seq
316 aa
AA seq
DB search
MKQGASNIAVKLIEVDDESAGQRIDNFLFTRLKGVPKSHIYRILRTGEVRRNGGRIQARD
RLDSGDLIRIPPIRSTVHELDGIPEAFVRARLESRILYEDSELLVLNKPAGMAVHGGSGI
SFGVIEGLREIRSEARFLELVHRLDRDTSGCLLIAKKRSALRTLHEQFRNDNVKKVYLAL
LAGTWARTRCIVDAPLKRSVLQGGERIVKVAREGKPAVTEFRRLECYVGSTLVEARPVTG
RTHQIRVHAQSMGHPIVGDDRYGDEKVNRESRRLGLKRLFLHALETVFLHPRTGEVLRVK
APIDQDLSQFLKTSLP
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaggcgcgagcaacattgccgttaaattgatagaagtggatgacgagagcgcg
gggcagcgcattgataactttctgttcacgcgccttaaaggagtgcctaaaagccacatc
tatcgaattctgcgtaccggcgaagtccgtcgtaatggagggcgaattcaagcccgggat
cggctggattcgggagatttgattcgaattcctccaattaggtcaacggttcacgagctt
gacggcatacctgaagcatttgtgcgggcgcgtttggaatctcggattctgtacgaagat
agtgagctcttggtgcttaataagcccgcagggatggcggtgcatggcggtagcggtata
agtttcggagtgatcgaagggttaagggagattcgttccgaagcaaggttcttggagctt
gtgcatcgtctggatcgggatacctcgggatgtttgctaatagccaagaaacgtagtgcc
ctccgaactctgcacgagcaatttcgtaatgacaatgtaaaaaaagtctatctggctttg
ctcgccgggacgtgggctagaacgcggtgtatagtggatgctccgctcaaaaggagcgtg
cttcagggtggtgaaagaattgtcaaggtggcacgagaggggaagccggcggttaccgaa
ttcagaagattggagtgctatgtaggctccacgttggttgaggctcgtccggtcactgga
cgaacacatcaaattcgcgttcatgcacaatctatggggcatcccatagtcggcgacgat
cgatatggcgatgaaaaggtcaatcgggaatctcgtcgacttggtttgaagcgtcttttt
cttcatgcgttggagactgtttttctccatccgcgtacgggggaagtgttaagggtaaaa
gctcccattgatcaggacctttctcaattcctcaaaacttcgctgccgtga
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