Modestobacter marinus: MODMU_4555
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Entry
MODMU_4555 CDS
T02167
Symbol
rho
Name
(GenBank) Transcription termination factor rho
KO
K03628
transcription termination factor Rho
Organism
mmar
Modestobacter marinus
Pathway
mmar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MODMU_4555 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmar03021
]
MODMU_4555 (rho)
03019 Messenger RNA biogenesis [BR:
mmar03019
]
MODMU_4555 (rho)
Transcription machinery [BR:
mmar03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MODMU_4555 (rho)
Messenger RNA biogenesis [BR:
mmar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MODMU_4555 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
AAA_25
NACHT
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
CCH89938
UniProt:
I4F2S5
LinkDB
All DBs
Position
complement(4549545..4551818)
Genome browser
AA seq
757 aa
AA seq
DB search
MSETTDLIDGASTAPSDEAAAAAGTAPRSRRRGSGLSGMLLPELQRLAGELGIPGTGKMR
KSDLVAAISERQVGGSDGAAAAPAPRTEETPSSAPLEAPVSGGANGTPVTPPTATGPATD
TPAAEPAAETAPTGRRRRGASRPAGAPTADAAVETPAVDASVAPAEPSAEAPTEAPAETV
TQAPAETERPQRGRNRDRAERAPREAGERAPRDGAERAPRDGAERAPRETAEREERAPRD
GNRAERDGEERGGRNRGDGEPSGNRGGRNRNDGGRDGNRSDGPRDGGRDGNRTEGARDGN
RSDGPRDGGRDGNRTDAGRSETRNEPRPETRTDEDDDDFDGGGRGRRGRRYRDRNRRGGN
APAGRERFEQGEPTVSEDDVLLPVAGILDVLDSYAFVRTSGYLTGPNDVYVSLSQVRRYG
LRRGDAITGAVRQPREGERKDKYNALVRLDSVNGLDPEQARNRPEFTKLTPLYPQERLRL
ETESHLMTTRIMDLVMPIGKGQRALIVSPPKAGKTMVLQSIANAISTNNPEVHLMVVLVD
ERPEEVTDMQRSVKGEVIASTFDRPPADHTTVAELSIERAKRLVEMGHDVVVLLDSITRL
GRAYNLAAPASGRILSGGVDSTALYPPKRFLGAARNIENGGSLTIIASALVETGSTMDTV
IFEEFKGTGNAELKLDRRLADKRVFPAVDVNASSTRKEEILLSPDELAIVIKLRRVLSAL
EPQQALELLLDRMRKTRNNIEFLMQVQKTTLGVGEKD
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgagaccaccgacctcatcgacggcgcgagcaccgccccgtccgacgaggcagct
gccgccgccgggacggctccccgttcccgccgccgtggcagcgggctgtccgggatgctg
ctgcccgagctgcagcgcctggccggcgaactcggcatcccgggcaccgggaagatgcgc
aagagcgacctcgtcgccgccatctccgagcggcaggtgggcgggtccgacggcgccgcc
gccgcgccggccccccggaccgaggagaccccgtcgtccgcgccgctggaggccccggtc
tccgggggcgccaacggcacccccgtgacgccgccgaccgcaaccggtccggccaccgac
accccggccgccgagccggctgccgagaccgctccgaccggccgtcgccgccgtggcgcg
agccgccccgccggcgccccgaccgcggacgccgccgtcgagaccccggccgtggacgcg
tccgtcgcgcccgcggagccgtccgccgaggccccgaccgaggccccggccgagaccgtg
acccaggccccggccgagaccgagcgcccgcagcgcggccgcaaccgggaccgcgccgag
cgggcaccccgcgaggccggcgagcgcgccccccgcgacggcgcggagcgtgcgccccgc
gacggtgccgagcgcgccccccgcgagaccgccgagcgcgaggagcgtgctccccgcgac
ggcaaccgggccgagcgggacggcgaggagcgcggcggtcgcaaccgcggcgacggtgag
cccagcggcaaccgcggcggccgcaaccgcaacgacggtggccgcgacggcaaccgcagc
gacggcccccgggacggtggccgcgacggcaaccgcaccgagggtgcccgcgacggcaac
cgcagcgacggcccccgggacggcggccgcgacggcaaccgcaccgacgccggccgcagc
gagacccggaacgagccccggcccgagacgcgcaccgacgaggacgacgacgacttcgac
ggtggcggccgcggccgccggggtcgccgctaccgggaccgcaaccgccgcggtggcaac
gcccccgccggtcgcgagcggttcgagcagggcgagccgaccgtcagcgaggacgacgtc
ctgctgccggtggccgggatcctggacgtgctggacagctacgcgttcgtccgcacctcg
gggtacctcaccggcccgaacgacgtctacgtctcgctgtcgcaggtgcgccgctacggc
ctgcgccgcggtgacgcgatcaccggcgccgtccgccagccccgcgagggcgagcgcaag
gacaagtacaacgccctggtccggctggactcggtcaacggcctggacccggagcaggcg
cgcaaccgccccgagttcaccaagctgacgccgctctacccgcaggagcgcctgcggctg
gagaccgagtcgcacctgatgacgacccggatcatggacctggtcatgcccatcgggaag
ggccagcgcgccctcatcgtcagcccgccgaaggccggcaagacgatggtgctgcagtcg
atcgccaacgcgatctcgacgaacaaccccgaggtccacctcatggtcgtgctcgtcgac
gagcggcccgaggaggtcaccgacatgcagcgctcggtgaagggcgaggtcatcgcctcg
accttcgaccggccgccggccgaccacaccacggtcgccgagctgtccatcgagcgggcc
aagcgcctggtcgagatgggccacgacgtcgtcgtcctgctcgactcgatcacccggctc
ggccgcgcctacaacctggcggcccccgccagcgggcgcatcctgtccggtggtgtcgac
tccacggcgctgtacccgcccaagcgcttcctcggtgccgcccgcaacatcgagaacggc
ggctcgctgacgatcatcgcctcggcgctggtcgagacggggtccaccatggacaccgtc
atcttcgaggagttcaagggcaccggtaacgcggagctcaagctggaccggcggctggcc
gacaagcgggtcttccccgccgtcgacgtgaacgcctccagcacccgcaaggaggagatc
ctcctctcgcccgacgagctggccatcgtgatcaagctccgccgggtgctgtcggcgctg
gagccccagcaggcgctggagctgctgctcgaccggatgcggaagacccgcaacaacatc
gagttcctcatgcaggtgcagaagaccacgctcggcgtgggcgagaaggactag
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