Corallococcus macrosporus DSM 14697: MYMAC_003868
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Entry
MYMAC_003868 CDS
T05096
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mmas
Corallococcus macrosporus DSM 14697
Brite
KEGG Orthology (KO) [BR:
mmas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmas03016
]
MYMAC_003868
Enzymes [BR:
mmas01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
MYMAC_003868
Transfer RNA biogenesis [BR:
mmas03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MYMAC_003868
Prokaryotic type
MYMAC_003868
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ATB48242
UniProt:
A0A250JXQ3
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All DBs
Position
4781060..4782658
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AA seq
532 aa
AA seq
DB search
MRIKQKPEDFSVKESYRFDEVDSGRHRVYLMDKQKLSTFDAVTRLRDAFGLKPGAISYCG
LKDKQGRTEQIIAVDGADVDMQDPDLRLKYLGRTDKPLSAANITSNRFSVTVRALQHASL
GPLNVAAAEVNRLGVINYFDSQRFGSLKHGQGFIAKDLIRGDFEAALHNYMAKPSELDRT
EDAKIKAFWKENWGRWDARVPYEGTRKYHRVLKSLRDQPGDYLRAFMQIDADYRAMLLFT
YQSFLWNEGVRRYLQLMLPREHLFPMRYQAGTLLFHRDASPEVLRTLRDATFPLLAPNST
FSDPKVEEAVRWVLGREKLRLEDLSIPGAERRLYFKHEERPLLSFPHKLVVGRTMPDELN
RDAIKVNVAFTLPPGAYATLVIKRLFHFEYAEDSAETIRASQRPKLAEAEAEAAAQLPSS
RRGPPRRDGSGARQAGDSRRGAGDREPRGTGAPGRRRAGPREVELLEPVSGRARTLAAKA
PEARPAEPTPPLGFRERQRQRKDARSAARAETEARRTAKPSAKAKPPKSRKK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
gtgcgaatcaaacaaaagcccgaggacttctccgtcaaggagtcataccgtttcgacgaa
gtcgactcgggacgtcaccgcgtctacctgatggacaagcagaagctgtccaccttcgac
gccgtgacgcggctgcgggacgcgttcgggctcaagccgggggccatcagctactgcggc
ctcaaggacaagcagggccggaccgagcagatcatcgcggtggacggcgccgacgtggac
atgcaggaccccgacctgcgcctgaagtacctgggccgcacggacaagccgctgtccgcc
gccaacatcacgtccaaccgcttctccgtcacggtgcgcgcgctccagcacgcgtcgctg
gggcccctcaacgtggccgccgccgaggtcaaccgcctgggcgtcatcaactacttcgac
agccagcgcttcggctcgctcaagcacggccagggcttcatcgccaaggacctcatccgg
ggcgacttcgaggccgcgctgcacaactacatggccaagccgtccgagctggaccggacg
gaggacgccaagatcaaggccttctggaaggagaactggggccgctgggacgcgcgcgtc
ccctacgagggcacgcgcaagtaccaccgcgtcctcaagtccctgcgcgaccagcccggg
gactacctgcgcgccttcatgcagatcgacgcggactaccgcgccatgctgctcttcacc
taccagagcttcctctggaacgagggcgtgcggcgctacctccagttgatgctgccgcgc
gagcacctcttccccatgcgctaccaggccggcacgctgctgttccaccgcgacgccagc
ccggaggtgctccgcacgctgcgcgacgccaccttccccctgctggcgcccaactccacg
ttcagcgacccgaaggtggaggaggccgtgcgctgggtgctgggccgcgagaagctccgc
ctggaggacctgagcatccccggcgccgagcgccggctctacttcaagcacgaggagcgg
cccctgctgtcgttcccgcacaagctcgtggtgggccgcacgatgccggacgagctcaac
cgggacgccatcaaggtcaacgtcgccttcaccctgccgccgggcgcctacgccaccctg
gtcatcaagcggctgttccacttcgagtacgccgaggacagcgcggagaccatccgcgcc
tcgcagcggccgaagctggcggaggccgaagcagaggccgccgcgcagctcccctccagc
cgccggggtcctccccgccgggacgggagcggcgcgcgccaggcgggcgacagccgccgg
ggcgccggagaccgcgagccccgcggcacgggcgccccgggtcgccgccgcgccggcccc
cgggaggtggagctgctggagcccgtctccggccgcgcccggacgctcgccgccaaggcc
cccgaggccaggccggcggagcccaccccgccgctgggcttccgggaacggcagcgccag
cgcaaggacgcccggtccgccgcccgcgcggagaccgaggcccggcggacggccaagccc
agcgccaaggccaagccgccgaaatcacggaagaaataa
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