Marinomonas mediterranea: Marme_3733
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Entry
Marme_3733 CDS
T01449
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
mme
Marinomonas mediterranea
Pathway
mme03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Marme_3733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mme03400
]
Marme_3733
Enzymes [BR:
mme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Marme_3733
DNA repair and recombination proteins [BR:
mme03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Marme_3733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
PriA_CRR
PriA-like_WH
zinc-ribbons_6
AAA_30
AAA_19
AAA_22
PIF1
GPP34
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
ADZ92943
UniProt:
F2JWS6
LinkDB
All DBs
Position
4113170..4115401
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AA seq
743 aa
AA seq
DB search
MQETLLTTQPYIKVALPVPMRRTFDYKVPKAIAVRHILQPGMRVKVPFGKSQRIGIIESL
ASESDWDDAQIKPLSALLDDAPVLDTEILSICEWAARYYHHPIGEVLFHALPVLLRKGES
ADFRTETWWFPSETGLKTPLDELKRAPRQVEFLKAVQQHENGLSQQVVSTLGLAPAAGKS
LEEKGLVYREQRQFLKMAETHAHQKQVPPILNDEQQVATDHIIHNTGTFHVSLLDGITGS
GKTEVFLRVIDKLIKEDKQVLVMVPEIGLTPQTLKRFENRLDTDIVLMHSNMTDRERLDA
WLLCRQGHAKVIIGTRSAVFMPIKNLGMIIIDEEHDASYKQQDGFRYHARDLAIKQAQSA
NAPVLLASATPSFESLNNARQQKFAWLKLRKRAGSAQMPTIERVDLRGQTLVHGLSEYTL
ETMKQCLARKEQVLVFLNRRGFAPTLMCHECGWIAACDHCDVNMTVHRKANKLHCHHCDH
HKALIFECPECHSRELFTVGEGTEQVEAALIPLFKDTPILRIDRDSTQRKSALTQITQKI
HEHDQAILVGTQMLAKGHHFPNVTLVVVMDADAGLFSADFRGMERTAQLITQVSGRAGRA
SKPGQVLLQTYHPDHEAIECLCERSYEEFALEGLQERADLALPPFYHQIIVRAESADEWE
ATQFLTHLREMLMPYCEAGIGFVGPYSAIIVRKAGQHRALLSIKSPKRGNLHRLAAIASQ
WLEQEFRSRKIRFAIDVDPLETY
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaacattgcttaccacacagccctatataaaagtagcattgcctgtaccgatg
cgacgtacattcgattataaagtgccgaaagccattgctgtacgccatatattgcaacct
ggtatgcgagttaaagttccctttggaaaaagccaacgcattggcattattgaatcgctt
gcgagcgagtcagactgggacgatgcgcaaataaagccgcttagcgcccttcttgatgac
gcccctgtgctcgatacagaaatactgtcaatatgcgaatgggcagcgcgttattatcat
caccctattggcgaagtgctgtttcatgctcttcctgttcttttacgcaaaggggaatcg
gcagactttagaaccgaaacatggtggttcccttcagaaacaggactaaaaacgccctta
gatgaattaaagcgcgctccgcgacaagtggaatttctaaaggcagtacaacaacatgaa
aatggactaagtcagcaagttgtttcaacactgggattagcgcccgctgcgggcaagagc
ctagaagaaaaaggcctcgtttatcgtgagcaacgccagtttttgaaaatggcagaaacg
cacgcgcaccagaagcaagtaccgcccattttgaacgatgagcaacaggttgcaacggat
cacataatacacaataccggcacgtttcatgtctcacttttagatggcattacaggaagc
ggcaaaacggaagtgtttctgcgagtcatcgacaaactgatcaaagaagataaacaagtg
ttagtgatggttcccgaaattgggctgaccccacaaaccttaaaacgatttgaaaacaga
ttggacactgacatcgtcttgatgcactccaacatgacggatcgcgaacgtttagacgct
tggcttctatgccgtcaaggtcacgcaaaagtcatcataggaacacgatcagccgttttt
atgccgattaaaaatttaggcatgatcatcatagatgaagaacacgatgcctcttacaag
cagcaagacggctttcgctatcatgctcgagatctggcgatcaaacaggctcaatcggct
aacgcaccggttcttctcgcgtccgctacaccatcgttcgaatctctcaataacgcccga
caacaaaagttcgcttggttaaaattacggaagcgagctggcagtgcgcaaatgccgaca
atagaacgcgttgacctaagaggacaaacactcgtccacggtttgagtgaatacacgctg
gaaacgatgaaacaatgcctagctcgaaaagagcaggtactggtctttttaaatcgtcga
ggttttgcccccacgttaatgtgccatgaatgtggctggatcgcggcctgtgatcattgc
gacgtcaacatgacggtgcacagaaaagccaataaactgcactgccaccattgcgaccac
cataaagcgctgatctttgagtgtccagaatgtcattcaagagagctatttaccgtcggc
gaagggacagagcaagttgaggccgcgttaattccactgttcaaagatacccccatctta
cgtattgatagagacagtacgcagcgtaaatctgcactgacgcagatcacgcaaaaaata
cacgagcacgatcaggccattctagtcgggactcagatgctcgcaaaaggccaccatttc
cccaacgtgacactggttgttgtgatggacgcagatgcgggactcttttcggcggacttc
agaggaatggaacgaacagcgcagttaattacccaagtttcggggcgtgcaggacgcgcc
agtaaacctgggcaagtactgttgcaaacctatcaccctgatcacgaagcgattgaatgt
ctatgcgagcgcagctacgaagagttcgctctagaaggcttacaagaacgagccgatcta
gcactaccgcctttctatcatcaaattattgttcgagctgaatcggcagacgaatgggag
gcaacccagttcttaacccatttaagagaaatgctcatgccgtattgtgaagcgggcatt
ggctttgtcggtccgtactccgccatcatcgtacgaaaagcaggtcaacacagggctctt
ctcagtataaaaagtccaaaaagagggaacttgcatcgattagctgcgatcgccagtcaa
tggctagagcaagaatttcgatcacgaaaaattcgctttgcaattgacgttgatccacta
gaaacttactga
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