Malurus melanocephalus (red-backed fairy wren): 130573295
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Entry
130573295 CDS
T09178
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03013
Nucleocytoplasmic transport
mmea03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130573295 (UPF3B)
03015 mRNA surveillance pathway
130573295 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmea03019
]
130573295 (UPF3B)
Messenger RNA biogenesis [BR:
mmea03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
130573295 (UPF3B)
mRNA cycle factors
P-body specific factors
130573295 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
130573295
NCBI-ProteinID:
XP_057221619
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MKEDKENARPKERRGAAAGPGVLLAAGPGTGPAAGTDGRXGAADLDRLERPKDKKETLSK
VVIRRLPPSLTKEQLEEHLQPLPEHDYFEFFANDSSLYPHMFSRAYINFKNQEDIVLFRD
RFDGYVFVDHKGQEYAAIVEFAPFQKAAKKKSKKKDAKTGTIEDDPEYKKFLESYSADDE
KLTSTPETLLEEIEARNKELIAKKTTPLLNFLKNKQRLREEKREERRRRELERKRQREEE
RRKWKEEERRKRKEAEKLKKVDRCPEKERDRSKEEPKIKLLKKPEKDEKDLERKEKSKKL
EKETLREEKNASSASAKRSDGETKEEKAKKSEDECVKDYRDRDRDFDRDREYERAQREKL
RRQEEERRRQKERYEKEKVFRRKEEEVKKERDLLREKGKKSDLTDFTSSTDKSEKVTKDD
KKEDTIKRDRIRNKDRPAMQLYQPGARSRSRLCQYEDSAAKPPDQGVDKKQEGETSHTKE
EE
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggacaaggagaacgccaggcccaaggagcggcgcggggccgccgccggsccg
ggggttctgctggccgcgggtccgggcacgggccccgccgctggcacggacggcagarcc
ggtgccgccgacctcgatcgcctggagcggcccaaggacaagaaggagacgcttagcaag
gtggtgatccgccggctgccgcccagcctgacgaaggagcagctggaggagcacctgcag
cctctgccygagcacgactacttcgagttcttcgcgaacgactccagcttgtacccgcac
atgttctcaagagcctacatcaacttcaagaaccaggaagacatagtcctcttcagggat
cgcttcgacggctatgtttttgttgatcacaaaggtcaggaatatgctgccatagttgag
tttgcacctttccaaaaagctgcaaaaaagaagagtaagaaaaaggatgccaaaactgga
actatcgaagatgatccagaatacaagaagtttttggaaagttacagtgcagatgatgaa
aaattaacctccactcctgaaactttattggaggaaatagaggcaagaaacaaagagcta
atagctaaaaagactactcctttattgaacttcttgaaaaataaacagagactgagagaa
gaaaaaagagaggagagaagaaggagagaattagaaagaaaaagacaaagagaagaagaa
agaagaaaatggaaagaggaggagagaaggaagagaaaagaagcagaaaaattgaagaaa
gtagacagatgcccagaaaaagaaagagacagatcaaaagaagaaccaaagattaagcta
cttaagaagcctgaaaaagatgaaaaagacttggagagaaaagaaaaatccaagaaactg
gaaaaagagactctgagggaggaaaaaaatgcgagtagtgcatctgccaaacgatctgat
ggggagacaaaagaagagaaggcaaaaaaatcagaagatgagtgtgtaaaggactacagg
gaccgagatagagattttgacagagacagagaatatgagagagcacagagagagaaattg
agacgccaagaagaggagcgtcggaggcagaaagagcgctatgagaaagagaaggttttt
agaagaaaagaggaagaggtgaaaaaggaragagacttactcagagaaaagggaaagaaa
agtgatcttacagactttaccagcagcacggacaaatctgagaaagtaaccaaagatgat
aaaaaagaggatacaattaaaagggatcgtatcagaaacaaggatcgcccagcaatgcag
ctgtaccagcccggagcccgaagccggagtagattgtgtcaatatgaagacagtgctgca
aagcccccagatcagggagtggataagaagcaggagggtgagaccagtcacacgaaggaa
gaggagtga
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