Malurus melanocephalus (red-backed fairy wren): 130577513
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Entry
130577513 CDS
T09178
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmea03000
]
130577513 (RC3H2)
04121 Ubiquitin system [BR:
mmea04121
]
130577513 (RC3H2)
Transcription factors [BR:
mmea03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
130577513 (RC3H2)
Ubiquitin system [BR:
mmea04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130577513 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-C3HC4_4
zf-C3HC4_2
Xin
Motif
Other DBs
NCBI-GeneID:
130577513
NCBI-ProteinID:
XP_057228921
LinkDB
All DBs
Position
Unknown
AA seq
1191 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNVGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAASPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLNKVGVNSTVSTTTGNVISVI
GSPEATGKMVPSTNGIANLETGVPQLIPRCADSSLRALENTKKGGKXGANGQNASGSPTE
SLPENKIGSPPKTPVSQAAATSAGPPNIGTEVNSVPPKSSPFVPRVPVYPPHSDNVQYFQ
DPRTQLSYEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYST
FPPRDRLNSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDIIRSNSLPPMD
VMHSSVYQTSLRERYNSLDGYYSVACQPPNEQRTVPLPREPCGHLKTGYDEQLRRKPEQW
AQYHTQKTPLVSSTLPMATPSPTPPSPLFSVDFSTEFSESVSDLSGAKFEEDHLSHYSPW
SCGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRAKEEDPIIPFSDG
PIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSAYGSDSA
SSARYAERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLD
EGSRLTLNLLSKEIDLRNGETDYPEDCADTKPDRDIELELSALDTDEPDGQGEQIEEILD
IQLGISSQEDQLLNGTTVENGHLLKQHQKESMEQKRQSLGEDLVILEEQKTILPVTSCFS
QPITTSVSNASCLPISTSVSVGSLILKTAHIMSEDKNDFLKPVANGRMVNS
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcagtggacagaatttctgtcctgcccaatctgctacaacgag
tttgatgagaatgtgcacaaacccatcagcttaggttgctctcacaccgtgtgcaagacc
tgcctgaacaagctccatcgcaaggcatgtccttttgaccagactgccatcaacaccgac
atcgatgtgcttcctgtgaactttgcactcctccagctggttggagcccaggtacctgat
catcagacagtaaagttgagtaatgtaggagagaacaaacattatgaagtagcaaagaaa
tgtgttgaggatttggcactctacttaaagccattaagtggaggaaaaggtgttgcaagc
ttgaatcagagtgcactgagccgtccaatgcaaaggaagcttgtgacactggtgaattgt
cagctggtggaggaggagggtcgggtcagagccatgagggcagctcggtcactgggagag
agaactgtcacagagctcatcctgcagcaccaaaatcctcagcagctttctgccaatctt
tgggctgctgtcagggcacgagggtgccaatttctaggaccagctatgcaagaggaggca
ctgaaacttgtattactggcactggaagatggctctgcactctcaagaaaagttctggta
ctttttgttgtgcaaaggctggaaccaagatttcctcaggcctctaaaacaagcattggt
catgttgtgcagctactgtatagagcatcgtgctttaaggtcactaaaagggatgaagat
tcttctctgatgcaacttaaggaagagttcaggagttatgaggctttgcggagagaacat
gatgcccaaattgttcacattgccatggaagcaggacttcgaatatcaccagaacagtgg
tcgtcccttctgtatggagacttggcacataaatcacacatgcaatccataattgacaag
ctccaatctccagaatcttttgctaagagtgtacaagagttgacgattgtcttgcagcgc
acaggggatcctgcaaacttaaacaggctgaggcctcatttagagctcctggcaaacata
gatccaaatccagatgcagcatctccaacatgggagcagcttgaaaatgcaatggtcgct
gtaaagactgtggtccatgggctggtggatttcatccagaattacagtagaaaaggccat
gaaactccacagccacaaccaaatagcaaatacaaaacaagtatgtgccgagaccttcga
cagcaaggggggtgtccaagaggaacaaactgtacatttgctcattctcaggaagagctt
gaaaaatatcgcttgaggaacaaaaaaatcagtgcaacagtgagaacattcccccttcta
aacaaagttggcgttaatagcaccgtctcaaccacaacgggaaatgtcatctcagtcata
ggaagccctgaggcaacgggcaagatggtgccaagcactaatggaatagctaatctggaa
actggggttccccagctgatccctcgctgtgcagactcctccctgagagctctggagaac
accaagaagggagggaagrctggagccaatggccagaacgcttctgggtcccccacagaa
tcacttcctgagaataaaattggttctccacccaagactcctgtaagccaggcagcagct
acctcagctggtcctcctaatattggaacagaagttaattctgtgcctccaaaatccagc
ccgtttgttcccagagtacccgtctaccctccacattctgataatgttcaatatttccaa
gatcccaggactcagctgtcatatgaagttccacagtatccacagacagggtattatcca
ccacctccaacagtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaat
aacgttccagaatcctccctcccacctgcttccgtgccatatgccgatcattacagtaca
tttccccctcgagatcgactgaattctccttaccagcctcctcctccgcagccgtatgga
ccagttcctcctgtcccctctggaatgtatgctccagtttatgacagcaggcgcatctgg
cgcccacagatgtacccacgagatgatattattaggagcaattctttacctcccatggat
gtgatgcactcatctgtctatcagacatcgttacgggagaggtacaactctctggatggg
tattactctgtggcttgtcaacctccaaacgagcagaggactgtgcctttaccaagggag
ccttgtggtcatttgaagactggttatgatgagcagctgagacggaagccagagcaatgg
gcacagtaccacactcagaaaactcctctggtatcgtcaacccttcctatggcaacacct
tctccaacaccaccttctcctctcttcagtgtagatttcagcacagagttctcagagagt
gtcagtgatttgagtggagctaaatttgaggaagaccatctctctcactattcaccgtgg
tcttgtggcactattggctcttgtataaatgctatcgactcagagcccaaggatgtgatt
gccaattccaatgccgtgttaatggatttggacagyggggatgtcaagaggagagtgcat
ttatttgaaacccagagaagggcaaaggaggaagatcctataatcccattcagtgatgga
cccatcatctccaagtggggtgcgatctccaggtcatcccgcacaggttatcacacgaca
gatccaatccaggccactgcttcccaaggaagtgctactaagcccatcagtgtatcagat
tatgtcccctatgtcaatgctgttgactcaagatggagtgcctatggctcagattctgct
tcatcagcacgttatgcggaacgggacaggttcatagttacagatttgtctggtcacaga
aagcattccagcactggagatctactgagtattgaattacagcaggccaaaagcaactcc
ttactccttcagagagaggcaaatgcacttgccatgcagcagaagtggaattctctagat
gaaggcagtcgtcttaccttaaatcttttaagcaaggaaattgatttgaggaatggtgag
actgattatcctgaagattgtgcagacacaaagccagaccgagacattgaattggagctg
tcmgccctcgatacagacgaacctgatggacaaggtgaacagatagaagagattctggac
atacagctcgggattagctcccaagaggatcagctgctcaatggaacaactgtagagaat
gggcatctgctaaagcagcaccagaaagaatccatggaacagaagagacaaagtttaggt
gaagaccttgtgattctggaggagcagaaaacaatcctgcccgtaacttcttgcttcagt
cagccgatcacaacatctgttagcaatgcaagctgcctgcccatcagcacatcagtcagt
gttggcagcctcattttgaaaactgctcacattatgtctgaggataaaaatgacttttta
aagcctgttgcaaatggcaggatggttaacagctga
DBGET
integrated database retrieval system
