Malurus melanocephalus (red-backed fairy wren): 130578005
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Entry
130578005 CDS
T09178
Name
(RefSeq) nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mmea03009
]
130578005
03036 Chromosome and associated proteins [BR:
mmea03036
]
130578005
Enzymes [BR:
mmea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130578005
Ribosome biogenesis [BR:
mmea03009
]
Eukaryotic type
Pre-60S particles
Helicases
130578005
Chromosome and associated proteins [BR:
mmea03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
130578005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
130578005
NCBI-ProteinID:
XP_057229754
LinkDB
All DBs
Position
Unknown
AA seq
829 aa
AA seq
DB search
MEEVCDGHSAVQSPRSSRWGGGDGRAARRRGGRGGPGRSSRMGAVWGRAARLGLPAVRAA
AAPASSGGRRLGWLCGSGAGPLVLLAAALPCGPARPPHFLRAGAGRVCWSRCVQSDPGTG
TGSSAVGRQPTAMPAAEPEHSPAEPQAPAAAESVRRGRRRKVKEESPEKKVKRQVKATRR
GKAEAEQAQPEESGLGDGDFEPPVPKKTKKIKEKSNSLVGERDASEHAVKSLSAVSDSVA
APDAQNVSAGEQDSDAEELTEEAKEGAFSNFPLSQNTINLLTARGVKYLFPVQVKTFQPI
YAGKDVIAQARTGTGKTLSFALPLIEKLQSVSQDGRRGRAPKVLVLVPTRELATQVAKDF
KNLTKKLSIACFYGGTPYKEQLDLLKSGIDILVGTPGRIKDHIQNSKLELSSVKHVVLDE
VDHMLDMGFAEQVEEILGSSYKKGSESNPQTLLFSATCPRWVYDVAKKYMKDEYEQIDLI
GKKTQRTATTVEHLAIQCRSSQRAGVLGDIIQVYSGSRGRTIVFCETKMEANQLAMNASL
KQDAQSLHGDIPQKQREITLKGFRNGVFEVLIATNVAARGLDIPEVDLVIQCSPPKDVDS
YIHRSGRTGRAGRTGICICLFQRREEDLLKQVEHKAGITFKRVGVPSATDVIKASSSDAK
KLLEAVPSAAVDYFRKSAQELIDEKGAVAALAAALAHISGASHIQQRSLLNSTAGFVTMV
LKCSIEIHTMSYAWRGLKEQLGDGVDNKVSAMRFLKGKMGVCFDIPVDELSNIQEQWKDT
RRWQLSVASELPELEEHPQEAGRGFSRFGNSRQGDFKRKSWFKNGNRGL
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtgtgtgacgggcacagcgcggtgcagtccccgcggagctcacggtgggga
ggaggtgacggaagggccgctcggcggcgcggcggaaggggcgggccggggcgcagcagc
cgcatgggggccgtgtggggccgggcggcgcgactcgggctccccgcggtgcgggcggcg
gcggccccggccagcagcggcgggcggcggctgggctggctgtgcggctccggggcgggc
ccgctggtgctgctggcggcagcgctgccctgcggcccggcccgcccgcctcacttcctg
cgcgccggggcggggcgcgtgtgctggagccgctgcgtccagagcgatcccggcaccggc
accggcagcagcgcggtcgggaggcagcccacagccatgcccgccgccgagcccgagcac
agccccgccgagccccaggcgccggccgccgcggagtcggtgcgccgcggccgccgcaga
aaggtcaaggaggagagcccggagaagaaggtgaagcggcaggtgaaggcgacgcggcgc
ggtaaggccgaggccgagcaggcgcagcccgaggagagcgggctgggggacggcgacttt
gagccccccgtgcccaagaagacgaagaaaattaaggagaagagcaatagtttagtagga
gagagggacgcgtcagagcacgcggttaaatcattatccgctgtgagcgacagcgtggca
gcccccgatgcccagaacgtgagcgccggagagcaggacagcgacgctgaggagctgaca
gaagaagcaaaagaaggcgccttttctaattttcctctctcacaaaacactatcaacctt
ctcacagctcgaggtgtaaaatacctattccctgtgcaagtgaagactttccagcccata
tatgctggcaaagatgtaattgctcaagctcgaacaggaactgggaaaaccctttccttt
gctcttccactgattgaaaaactccagagtgtctcgcaggatgggagaagaggccgtgca
ccaaaagtgctggttcttgttccaactagggaactggccactcaggtagctaaagacttc
aagaatctcacaaagaaactgtcaattgcatgtttttatggaggaactccatataaagag
cagcttgatctacttaaaagtggcatcgatattctagtgggaactcctggacggatcaaa
gaccacattcagaatagcaagctggaactctccagtgtgaagcatgttgttttggatgaa
gtggatcacatgttagacatgggctttgctgagcaagtggaagaaatcttgggatcgtcc
tataagaaaggctcagagagcaacccccagacactgctgttttctgcaacttgtccacga
tgggtttatgatgtagcaaaaaaatacatgaaagatgagtacgaacagattgacctgatt
ggaaagaagactcaaaggacagccacgactgtggaacacttggctatacagtgtcgctca
tctcagagagcgggagttcttggggacatcattcaagtctacagtggcagccgtggacgg
accattgtcttttgtgagaccaaaatggaagcaaatcaactggctatgaatgcttcactc
aaacaggatgcccagtccttgcacggtgacattccacagaaacagagagaaattacattg
aaaggcttcagaaacggtgtgtttgaagttctgattgcaacaaatgtagctgcccgtggt
ttggatattcccgaggttgaccttgttatacagtgctcaccaccaaaagatgttgattcc
tacatccatcgttctggacgcacgggtcgagctggccggaccggcatctgcatttgtttg
tttcagagaagagaagaagatcttctgaaacaagtcgagcacaaagcaggtattaccttc
aagcgtgtaggcgttccctctgcaacagatgtaattaaagcttcaagcagtgatgctaaa
aagttactggaggctgttccttctgctgcagtagactacttcagaaaatcagcccaagag
ctgatagatgagaagggggcggtggctgccctggctgcagccctggcgcacatttctggg
gcatctcacatccagcagcgctccctgctcaactcaacagctggctttgtgaccatggtg
ttgaagtgttcgatagagatccataccatgagctatgcctggcgggggctgaaagaacag
ctcggggatggagttgataacaaagtgtctgcaatgcgtttcctcaaggggaagatgggt
gtgtgctttgatatccctgttgatgagctgagtaacatacaggagcagtggaaggacacc
cggcgctggcagctgtcagtggcgagtgaattgcctgagctggaagagcatccccaggag
gcaggacgaggcttctccaggttcggaaacagcaggcaaggagacttcaagagaaaaagc
tggttcaagaatggaaatcggggactttaa
DBGET
integrated database retrieval system
