Malurus melanocephalus (red-backed fairy wren): 130579684
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Entry
130579684 CDS
T09178
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03250
Viral life cycle - HIV-1
mmea04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
130579684 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
130579684 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmea03400
]
130579684 (SAMHD1)
DNA repair and recombination proteins [BR:
mmea03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
130579684 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
PDEase_I
HD_assoc_2
HARE-HTH
Motif
Other DBs
NCBI-GeneID:
130579684
NCBI-ProteinID:
XP_057232641
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All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MGSPAGAPAKRARCDGTRGPAGPGSDRSDPRLWDTEWLCQHLSRCGVGEPSLLRRFRESG
VTARMLLDLPACAPEVTRVCCPAERLEVLACLMQLQQQPVEVMKVFNDPVHGHIEMHPLL
VRIIDTPQFQRLRYIKQLGGTYFVFPGASHNRFEHSLGVGYLAGCLVRTLKERQPELDIT
PRDILCVEIAGLCHDLGHGPFSHMFDGRFIPLTRPDLKWKHETASVQMFEHLITSNKLEK
VMESYGLVLEEDMLFIKEQIGGPVDENACEKSWPYRGRPKEKSFLYEIVANKKNGIDVDK
WDYFARDCHHLGIPNNFDYKRLLIFTRVCEVKNQKHICTRDKEVENVYEMFHTRYCLHRR
AYQHKTGNIIEIMITEALQKADKFFEIRGSGGKVYQISTAMEDMEAYTKLTDCIYLEILH
SSHPELEEAREILCKIERRELYKFLGETRPESKKAVVKSNGLAESIANSKPEKDPPDVEL
KAENFIVDVINMDYGMKDQNPIDQVHFYCKADPSKAVNISKEQVSKFLPITFMEQVVRVY
YKSQDPYIISCAKQYFVQWCMENDFTKPQDGDVVAPHLTPMKKSWNNMADDERRRASEPN
CRQMLSFDE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggggagcccggcgggcgctcccgccaagcgcgcgcggtgcgatgggacccgcggcccc
gccgggcccggcagcgaccgcagcgaccctcggctgtgggacacggagtggctctgccag
cacctctcccgctgcggcgtgggcgaacccagcctgctgcgccgctttcgagagagcggg
gtcaccgcgaggatgctgctggacctgccggcctgcgcccccgaggtcacccgcgtctgc
tgcccagctgagcgactggaagtgctggcgtgcctgatgcagctgcaacagcagcccgtg
gaggtgatgaaggtttttaacgatcctgttcatggccacattgaaatgcatcccctgctt
gttcggatcatcgacacgcctcagttccagcggctccggtacatcaagcagctgggtggc
acatactttgtttttccaggagcctctcacaaccgctttgaacactccctgggggttggt
taccttgcaggatgtctggttcgtacactgaaggagagacaaccrgaactggatataacc
ccgcgagacatcctctgtgtagaaattgctgggctttgtcacgatttgggtcatgggcca
ttttcacacatgtttgatggaagatttattccactcactcgtccagatttgaagtggaag
catgaaactgcttctgttcaaatgtttgagcatttgatcacttccaataaactggaaaaa
gtcatggagtcatatggtcttgtccttgaagaagatatgctcttcatcaaggaacaaata
ggagggcctgtagatgaaaatgcctgtgaaaaatcgtggccctaccgtggtcgaccaaag
gagaaragtttcctctatgagatagtagctaacaaaaaaaatggcattgatgttgacaag
tgggattattttgcaagggattgccatcacctgggaattccaaataattttgactataag
cgattgcttatcttcactcgggtctgtgaagtgaaaaaccagaagcacatctgtacccgt
gacaaggaagttgaaaatgtgtacgagatgttccacactcggtattgcctgcaccggaga
gcataccagcataagactggcaacatcattgaaataatgattacagaagcccttcaaaaa
gcagataaattttttgaaataagaggctctggaggaaaagtgtatcagatttctacagca
atggaggacatggaagcctacactaaactaactgactgtatctacctggaaattctgcac
tcaagtcatccagaactggaggaggcacgagaaattttgtgtaaaatagaacgacgtgaa
ttatacaagtttttaggagagactcgacctgaatcaaagaaggcagttgtaaagagtaat
ggcctggcagaaagcattgctaattccaagcctgagaaggaccctccagatgtggagcta
aaggctgagaatttcatagtcgatgttatcaacatggattatggaatgaaagatcagaat
ccaattgaccaggttcacttttattgcaaggctgatccttccaaggcagtcaatatcagt
aaagaacaggtttcaaagtttttacccataacatttatggagcaggttgtccgggtttat
tacaaaagtcaggatccatatattatttcatgtgcaaaacagtactttgttcaatggtgc
atggagaatgatttcaccaaaccacaggatggtgatgttgttgcccctcatttaactcca
atgaagaaatcgtggaataatatggcagatgacgaacgcaggagagcctcagaacccaac
tgcagacaaatgctttcttttgatgagtaa
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