Candidatus Mycobacterium methanotrophicum: M5I08_07660
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Entry
M5I08_07660 CDS
T08748
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
mmeh
Candidatus Mycobacterium methanotrophicum
Pathway
mmeh00521
Streptomycin biosynthesis
mmeh00523
Polyketide sugar unit biosynthesis
mmeh00541
O-Antigen nucleotide sugar biosynthesis
mmeh01100
Metabolic pathways
mmeh01110
Biosynthesis of secondary metabolites
mmeh01250
Biosynthesis of nucleotide sugars
Module
mmeh_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
mmeh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
M5I08_07660 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
M5I08_07660 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
M5I08_07660 (rfbC)
Enzymes [BR:
mmeh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
M5I08_07660 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Trp_syntA
Motif
Other DBs
NCBI-ProteinID:
UQX12163
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Position
1403706..1404251
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AA seq
181 aa
AA seq
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MYTATEVAGVMIVDIDPHRDDRGFFSRSFCSDEFGTHGLISAVAQTNISYNYARGTLRGL
HRQGPPYAEAKLVRCTRGAIVDVAVDVRPESRTYGEHVMVQLSADNRRALFLPPYVAHGF
QTLADNTEVLCQVSGSYAPASEQGFRWDDPKFGIAWPLRVAVISEEDSSWPLLAPVASAA
S
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgtatacggccactgaagtcgcaggtgtgatgatcgtcgacatcgatccgcaccgcgac
gaccgcggtttcttctcgcgttcgttctgttccgacgaattcggcactcacgggttgatt
tcggctgtcgcgcagacgaacatctcctacaactacgcccgcgggacgcttcgaggcctg
catcgtcagggacctccgtacgccgaggccaagttggtgcgctgcacgcgcggcgcgatt
gtcgacgtcgcggtcgacgtccgacccgagtcgcgtacctacggcgagcacgtcatggtg
cagctcagcgctgacaaccgtcgggccctgttcttaccgccttatgtcgcacatggcttt
caaacgttggctgacaacaccgaagtcctctgccaggtcagcggttcctacgcacctgcc
agtgagcagggcttccgttgggatgacccgaaattcggcatcgcatggccgttgcgggtc
gccgtcatttccgaggaagactccagctggccgctcttggcgccggtcgcgagcgcggcg
tcatga
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