KEGG   Mycoplasmopsis meleagridis: NCTC10153_00031
Entry
NCTC10153_00031   CDS       T07139                                 
Symbol
polC
Name
(GenBank) DNA polymerase III polC-type
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
mmel  Mycoplasmopsis meleagridis
Pathway
mmel03030  DNA replication
mmel03430  Mismatch repair
mmel03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mmel00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NCTC10153_00031 (polC)
   03430 Mismatch repair
    NCTC10153_00031 (polC)
   03440 Homologous recombination
    NCTC10153_00031 (polC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mmel03032]
    NCTC10153_00031 (polC)
   03400 DNA repair and recombination proteins [BR:mmel03400]
    NCTC10153_00031 (polC)
Enzymes [BR:mmel01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NCTC10153_00031 (polC)
DNA replication proteins [BR:mmel03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     NCTC10153_00031 (polC)
DNA repair and recombination proteins [BR:mmel03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     NCTC10153_00031 (polC)
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T DNA_pol3_finger HHH_6 PHP HHH_3 tRNA_anti-codon DNA_pol_A_exo1 Zn-ribbon_8
Other DBs
NCBI-ProteinID: VEU77260
LinkDB
Position
1:28473..32837
AA seq 1454 aa
MNDDELHFEEFCKNLNFEIPYSMRSSSLIIQETSDNKTFNFLLNFNFSNLVDIEDLKNFI
KILGKNKESMKNTSVFFNFSNEQYEIKNILIYIKKIISKPKYKTLFTFDFDKKFEKKNDN
TYSFILNDDFYNEEVIKAIKHLENKFYKLGLTKVKFIYKKESGNSDTKITVNTENNNGSE
IVKKLKNNPEINNDLSSKKEFVLSKNNKKNEYEYYKLRDLEDYYHDLNVQIEGLIFSIEH
KELINSKKNKHLYILNITDYDSGIQVQMFKENELNEEEKKIFKINNWVKFFGRYTQKIAF
GKPLNVVYLDNYVKGNGPIVLKKDNLSKKRIELHVSSKMNTMDGLMQPDEIIDSSIELGM
NAVAIMDTNGCQGYPKFYNHSLKCPDFKPLYGTAFSVISNKFNTILGTFKNQNLRNASYV
SFDIETSSLLARFGDIIEFGSVEINNLRVENKEQFFIKPNKPINKFTSNLTGISNSMLEN
GLEINEALDRIYEILNNKIALAHNAKFDFNFIKQKFYQQGKEFPNFAVIDTLKVSRLLFP
NENRHRLKNLADRLEIKYDEEVAHRGDYDAKVLGEIWCQLIISLEKIGIYDLNQLSNYVN
DALIKREFSYEISTLAKNNRGLKDQFDLVSELLTNKFSIESPKIFFDKVREKENILIGSG
TLKSKLIEDYFYSSHEEFLKTIDMFDYIEIPAPQVFSHWIAYGDITEEELNNALKEIILV
AKNKGKIVVATGDVKYKSELDKKAYEIVVYAKGIGKARHFLYSYERAKNNTLKIPNQYFL
NTLEMLEQFSFLNDKELINEIVIENTHKIANMCENIQVIKKDLFKPEFDNSEIKLKELVY
KTAREKYGVVLPKFIEERIKAELDPIINHGFSVIYWISHVLIKESIENGYVVGSRGSVGS
SITAYLSGVSEVNPLPAHYICKNCKYFEITKDEKISSGFDLDPKKCPRCSEILDTDGHTI
PFETFLGFDADKVPDIDLNFSGDIQPKIHDKVRMLFGPNNTFKAGTVQTVAEKTAFGYVK
AYFEEKNEVANDIYMNYLANKIMDLKRTTGQHPGGIIIVPKEYSIFDFTPINYPANDIQA
DWKTTHFDYKAIHDNLLKLDILGHDNPTIIKFLESKTGVKTHQIPKKDKNLIKLFSSPEP
LGIKSEDIMGEVTGALGIPEFGTSFVRRMLASSKPKSFADLISLSGLSHGESVWTGNAEE
LVVKHNFNLSEVISCRDDILVNLLKIEGIDRKKAFKIMENVRKGKGLTSTEENYLLEHNV
PNWQIESMKKIKYMFPKAHATAYVLMAWWIAYYKLNFPLEFYASYLSIRPDNYDLESMID
EKGGSKVKNKLMQLYKLDKSKEIKETDKKMIPMFEIIQEMYARGFNISNIDLKKSLATEW
IIDNENKCLIPPFNAVSQLGEAIANSIVKARNQKEFISTEDFNKRTGINRTLLNKLKTMG
IFDELDDTNQMTLF
NT seq 4365 nt   +upstreamnt  +downstreamnt
atgaatgatgatgagttacattttgaagaattttgtaaaaatttaaatttcgaaattcct
tattcaatgcgaagttcatctttaattattcaagaaacttcagacaataaaacatttaat
tttttgttaaattttaatttttcaaatcttgtagatatagaagatttgaagaattttata
aaaatattaggaaaaaataaagagagtatgaaaaatacatcagtattttttaatttttct
aatgaacaatatgaaataaaaaatattttgatttatattaagaaaataatatctaaacct
aaatataaaactttatttacttttgattttgataaaaaatttgagaagaaaaacgataat
acttattctttcattttaaatgatgatttctataacgaagaagtaataaaagcaataaaa
catttagaaaataaattttataaattaggtttaacaaaagttaaatttatttataaaaag
gaaagtggaaattcagatactaaaataactgtaaatacagaaaataataatggttctgaa
atagtaaaaaagttaaaaaataatccagaaattaataatgatttatcatcaaaaaaagag
tttgttttatctaaaaataacaagaaaaatgaatatgaatattataaacttagagattta
gaggattattatcacgatttaaacgttcaaattgagggtttaatttttagcatagagcac
aaagaattaattaattctaagaagaataaacatctttatatattaaacataacagactat
gatagtggtattcaagtacaaatgtttaaagaaaacgaattaaacgaagaagaaaagaaa
atttttaaaataaataattgagtaaaatttttcggcagatatacacaaaaaattgctttt
ggaaaaccattaaatgtagtttatcttgacaattatgtaaaaggcaatgggccaattgtt
cttaaaaaagacaatttaagtaaaaaaagaattgaattacatgttagttcaaaaatgaat
actatggatggattaatgcaaccagatgagataattgattcatctatagaattaggaatg
aatgcagttgcaataatggacacaaatggatgtcaagggtatcctaaattttataatcat
tctttaaaatgccctgattttaaacctctttatggaacagcttttagtgttatatcaaac
aaatttaatactattttaggtacttttaaaaatcaaaatttaagaaatgcttcttatgta
tcttttgacatagaaacttcttcattattagctagattcggtgacattattgaatttggt
tctgtagaaataaataatttaagagtcgaaaataaagaacaattttttattaagccaaat
aaacctatcaataaatttacatcgaatttaactgggataagtaacagtatgttagaaaac
ggtttagaaattaatgaggcgttagatagaatatatgaaatattaaataataaaatagct
ttagcccataatgcaaaatttgattttaactttattaaacaaaaattttatcaacagggc
aaagaatttcctaattttgctgtaattgatactttaaaagtttctagattgctttttcct
aatgaaaacagacatagacttaaaaacctggctgatagacttgaaattaaatatgatgaa
gaagttgcccatcgtggagattatgatgcaaaagttttaggagaaatatgatgtcaattg
attatttccttggaaaaaattggaatttatgatttaaaccaattatctaattatgtaaac
gatgctttaataaaaagagaattttcttatgaaataagtacattagcaaaaaataatcga
ggactaaaagatcaatttgatttagttagcgaacttttaactaataagttttctattgaa
tctccaaaaatatttttcgataaagtaagagaaaaagaaaatattttaataggttctggc
acattaaaaagtaaattaatagaagattatttttatagttcacacgaagaatttcttaaa
acaattgatatgtttgactacattgaaattcctgcgccacaagtattttcacactgaatt
gcttatggtgatataactgaagaggaattgaataatgccttaaaagaaattattttagtt
gctaaaaataaaggaaaaattgttgttgccacaggtgatgtaaaatataaatcagaacta
gataaaaaagcttatgaaatagttgtttatgcaaaaggtattggaaaagcaagacacttt
ttatacagctatgaaagagcaaaaaacaatacattaaaaattcctaatcaatatttttta
aatactttagaaatgcttgaacaatttagttttctaaacgataaagagttaataaatgaa
atagtaattgaaaatacacataaaatagccaatatgtgtgaaaatattcaagttattaaa
aaggatttatttaaaccagaattcgataattcagaaattaaattaaaagaactagtatac
aaaacagcgagagaaaaatatggtgtagttttgcctaaattcattgaagagagaataaaa
gctgaacttgatccaatcattaatcatggtttttctgtaatttattgaataagccatgtt
ttgatcaaagaatcaatcgaaaatggatatgtagtgggtagtcgtggatcagtaggttca
tctataactgcctatttgtcaggagttagtgaagttaatcccctgcctgctcattatatt
tgtaaaaattgtaaatattttgaaattactaaagatgaaaaaatttcatcaggttttgat
ttagatcctaaaaaatgtcctagatgtagcgaaatattagacactgacggccatactatt
ccatttgaaacttttctaggttttgacgcagataaagttccggatattgatttaaatttt
tcaggcgatatacaacctaaaatacatgataaagttagaatgctttttgggccaaataat
acttttaaagcaggaactgtacaaactgttgcagaaaaaacagcttttggttatgtcaaa
gcttattttgaagaaaaaaatgaagtagcaaatgatatttacatgaattatttagccaat
aaaatcatggatttaaaaagaacaactgggcagcaccctggaggaattattatagttcca
aaagaatatagtatttttgattttacacctataaactatccagcaaatgatattcaggca
gattgaaaaacaactcattttgattacaaagcaattcatgacaatttacttaaattagat
attttaggacatgataatccaacgattataaaatttttagaatctaaaaccggagtaaaa
actcatcaaatacctaaaaaagataaaaatctaattaaattatttagttctcctgaacct
cttggaattaaatcagaagatattatgggagaagttacaggagctttaggaattcctgaa
tttggtacttcttttgtaagaagaatgttagcttcatctaagccaaaaagttttgctgat
ttaatttctttatctggtctatcgcacggagaaagtgtatgaacaggaaatgcagaagaa
ttagtagtaaaacataattttaatttaagcgaagttatctcatgtcgtgatgatatatta
gttaacttattaaaaattgaaggaatagatagaaaaaaagcatttaaaattatggaaaat
gttcgtaaaggtaaaggactaacttctacggaagaaaattatttacttgaacacaatgtt
cctaattgacaaattgaaagcatgaagaaaataaaatatatgtttcccaaagcgcatgct
actgcatatgttttaatggcttgatgaatagcttactataagttaaatttccctttagaa
ttttatgcttcctatcttagcattagacctgataattatgatttagaaagtatgatcgat
gaaaaagggggttctaaagtaaagaataaattgatgcagttatacaaattagataagtcc
aaagaaattaaagaaactgataaaaaaatgattcctatgtttgaaataattcaagaaatg
tatgcaagaggatttaacataagtaatattgatttaaagaaatctttagcaacagaatga
ataattgacaatgaaaataaatgtttaataccgccttttaatgcagtttctcaattggga
gaagccattgctaattcaatagtaaaagcaagaaatcagaaagaatttatttctacagaa
gattttaataaaagaacgggaattaatagaactttacttaataaacttaagacaatggga
atttttgatgaattagacgatactaaccaaatgactttattttag

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