Methylococcus mesophilus: OOT43_16605
Help
Entry
OOT43_16605 CDS
T09468
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mmeo
Methylococcus mesophilus
Pathway
mmeo03410
Base excision repair
mmeo03430
Mismatch repair
mmeo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OOT43_16605 (recJ)
03430 Mismatch repair
OOT43_16605 (recJ)
03440 Homologous recombination
OOT43_16605 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmeo03400
]
OOT43_16605 (recJ)
DNA repair and recombination proteins [BR:
mmeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
OOT43_16605 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
OOT43_16605 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
OOT43_16605 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
RecJ_OB
DHH
Beta-lactamase2
DUF4482
Motif
Other DBs
NCBI-ProteinID:
UZR28319
LinkDB
All DBs
Position
3511800..3513620
Genome browser
AA seq
606 aa
AA seq
DB search
MLYHPVPKRIVRRPRPAGAGSGSGSAAGIAAEPLLRAKPLDAPPLLARLYESRSIFAPED
LGRSLNELPPPSLLKGMDAVTAELEAAIRGQKSIMIVADFDADGATSCAVAMRGLRALGA
ERVSFIVPNRFTCGYGLTPELVELIFRGSAKPPDVLLTVDTGIACHAGVAAAKARGMKVL
VTDHHLPGESLPAADAIVNPNLPGDEFPGKALAGVGVIFYVLSGLRSRLRESGWFDGVRQ
PPNLAELLDLVALGTVADVVPLDRVNRILVHQGLQRIRAGRACSGIRALLEVADRNRGGA
APTAGTIGFTLGPRLNAAGRLDDMSLGIACLLAGDMTAAKELAELLDEMNRERKTIEAQM
QAEAWAMLQIAAEPLPQPSDRWSGSAAIMFDPAWHQGVIGILASRIKDRLHRPVIAFARG
EDGLLKGSARSIAGVHVRDVLCAVSARHPGIIVRFGGHAMAAGLTLEESRLAAFTEAFEA
EVAGLLEGVDLEHAVVTDGELPPDDFHLDTARCLRDAGPWGQGFPEPLFDGEFDVLGMRI
VGEKHLRLTLKVPGAARQVEGIAFFVADPPEWLGCRRLRAAYRLDVNEFRGVSSLQLGIE
YMEPVS
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgctttaccaccccgtaccaaaaagaatcgttcgtcgtccgagacctgccggcgcaggc
agtgggagcggctccgccgcgggtatcgcggcggagccgctcctacgggctaagccgctg
gacgctccgcccctgctcgcccgcctctacgaaagccgttcgattttcgcgccggaagac
ttggggcgctcgctgaacgaactcccgccgccttcgttgctgaaaggcatggatgcggtg
acggcggagctcgaggcggcgatccgcgggcagaagtcgatcatgatcgtggccgatttc
gatgcggacggtgcgacgagctgcgcggtggcgatgcggggcttgcgggcgctgggcgcc
gagcgggtgtccttcattgtacccaaccgcttcacttgcggttacggcctcacgccggag
ctggtcgaactgatatttcggggcagcgccaagcccccagatgtgcttctcaccgtggat
accggcatcgcctgccatgccggcgttgcggcggccaaggcgcggggaatgaaggtgctg
gtcaccgatcaccacttgcccggggagtcattgccggcggcggatgcgatcgtcaacccc
aatctgcccggcgacgaatttcccgggaaggcgctggcaggcgtcggcgtcattttctat
gtgctttcggggctgcgtagccgtctgcgcgagagcggctggttcgatggcgttcgacag
ccgccgaacttggcggaattgctggacctggtggcactgggaaccgtcgcggacgtggtt
cccctggaccgggtcaaccgcattctggtgcatcagggattgcagcggattcgcgcaggc
cgggcctgctccggcattcgggcgctgctggaggtggccgacaggaatcgcggcggcgcc
gctcccacagcgggcacgatcggattcacgctgggacctcggctgaacgcggccggcagg
ctcgacgacatgagcctgggcatcgcctgcctgctggcgggcgacatgaccgccgcgaag
gagcttgcggagctgctggatgagatgaaccgcgagaggaagacgatcgaggcccagatg
caggccgaggcctgggcgatgttgcagatcgcggcagagccgctcccacagccatccgac
cgttggagcggctctgccgcgatcatgttcgatcccgcttggcatcagggggtgatcggc
attctggcgtcgcggatcaaggaccggctgcatcggccggtgatcgcgttcgcgcggggt
gaggatgggttgctcaagggatcggcgcggtcgatcgccggggtgcacgtgcgtgacgtc
ctgtgcgccgtctcggcccgccatcccggcatcatcgtccgcttcggcggccacgcgatg
gcggccggccttaccctggaggagagccgtctggcggcgttcacggaggcgttcgaggcg
gaagtggcgggtttgctcgaaggggtggacctggagcatgcggtggtgacggatggggag
ctgccgccggacgacttccatctggacacggcgcgctgcctgcgcgatgccggcccctgg
ggccaggggttcccggagcccttgttcgacggggagttcgacgtgctgggcatgcggatc
gtcggtgagaagcatctccggctgacgctcaaggtgccgggtgcggcgcgccaagtggaa
gggattgcattcttcgtcgccgatccgccggaatggctggggtgccggcggctgcgcgcg
gcctaccggctggacgtcaacgagttccggggcgtttccagccttcagctcggcatcgag
tacatggagccggtgtcctag
DBGET
integrated database retrieval system
