Mercenaria mercenaria (northern quahog): 123526536
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Entry
123526536 CDS
T07835
Name
(RefSeq) general transcription factor IIH subunit 2-like
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03022
Basal transcription factors
mmer03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123526536
09124 Replication and repair
03420 Nucleotide excision repair
123526536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmer03021
]
123526536
03400 DNA repair and recombination proteins [BR:
mmer03400
]
123526536
Transcription machinery [BR:
mmer03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
123526536
DNA repair and recombination proteins [BR:
mmer03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
123526536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
Castor1_N
Motif
Other DBs
NCBI-GeneID:
123526536
NCBI-ProteinID:
XP_045161662
EnsemblRapid:
LOC123526536
LinkDB
All DBs
Position
14:21632918..21660643
Genome browser
AA seq
400 aa
AA seq
DB search
MTEEDDKGYRWETEYEKTWEALQEDDEGSLQPSINDMLHKAKRRKLLEKITNVRLGMMRH
MFIIIDMSVSMDDQDLKPTRLVCSLKLLEHFIEEYFDQNPISQLGIIVTKNKRAEKVTEL
GGNPRRHITALQKLKERTCQGEPSLQNSLELAMQTLRHMPSHASREVLVLFGSLTTCDPG
DILETLKLLKETHIRCSMIGLAAEVRICKKLCSDTNGKYTVILDESHFKDLLNQHTSPPP
AMMNTESSLIRMGFPHHHLGGDRSGDKPSMCMCHLDSKSVEGFSTTGYFCPQCKSKYCEL
PVECKACGLTLVSAPHLARSYHHLFPLDQSQEIPVTDFDPGQNIYCFACQIQIQDQTVYQ
CRKCKRIFCIDCDIFVHETLHSCPGCASSRKTQTAEAVFT
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgacggaagaagatgacaagggttatcgttgggaaacagaatatgaaaagacatgggaa
gcattgcaggaggatgatgaaggttctctacagccaagcattaatgacatgttgcacaaa
gctaaaagaagaaaattgcttgaaaaaatcacaaatgttaggctgggaatgatgaggcac
atgtttatcatcattgacatgtcagtttcgatggatgatcaggacctgaaaccaacaagg
cttgtttgctctttaaagttattggaacattttatagaagaatattttgaccagaaccct
ataagccagcttggtattatagtgacaaagaacaaaagggccgaaaaagttactgaactt
ggaggcaatccaagacgtcatataacagctcttcagaaattaaaggagagaacctgtcag
ggagagccatcattacagaactcacttgaactggctatgcaaactctcagacatatgcca
agtcatgcaagtagagaagtactagtgttgtttggaagtttaacaacatgcgatcctgga
gatattctggagactttgaagttgctaaaagagacacatataagatgttcaatgattggc
ctggcggctgaggtcagaatctgtaagaagctgtgttcagatacaaatggtaaatacact
gtgatattagatgaaagtcattttaaagatctgttaaatcaacatacaagtcctccgcca
gccatgatgaatacagaatcctccctgatcagaatgggatttccacatcaccatctaggt
ggagacagatctggtgataaaccatctatgtgtatgtgtcatcttgacagtaaatcagtt
gaaggtttcagtacaacagggtatttctgtccacagtgtaagagtaaatattgtgaacta
cctgtggagtgcaaggcttgtggtttaacactggtatcagctccgcatcttgctcggtct
taccatcatctgtttccgctagatcagtcacaagaaattccagtcacagactttgatcct
gggcaaaacatatactgctttgcatgtcagattcaaatacaggaccaaacagtgtaccag
tgtcgaaaatgcaagcgtatattctgtatagactgtgatatatttgtgcatgaaactctt
cactcatgtcctggttgtgcaagctctcgtaaaacgcagactgcagaagctgtcttcact
tag
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integrated database retrieval system
