Mercenaria mercenaria (northern quahog): 123530478
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Entry
123530478 CDS
T07835
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase BAP1-like isoform X1
KO
K08588
ubiquitin carboxyl-terminal hydrolase BAP1 [EC:
3.4.19.12
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
123530478
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mmer01002
]
123530478
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmer04121
]
123530478
03036 Chromosome and associated proteins [BR:
mmer03036
]
123530478
Enzymes [BR:
mmer01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
123530478
Peptidases and inhibitors [BR:
mmer01002
]
Cysteine peptidases
Family C12: ubiquitin C-terminal hydrolase family
123530478
Ubiquitin system [BR:
mmer04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UCH
123530478
Chromosome and associated proteins [BR:
mmer03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
123530478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C12
UCH_C
CdiI_2
Motif
Other DBs
NCBI-GeneID:
123530478
NCBI-ProteinID:
XP_053377290
EnsemblRapid:
LOC123530478
LinkDB
All DBs
Position
13:21718181..21764556
Genome browser
AA seq
609 aa
AA seq
DB search
MDKGWLELESDPGLFTLLLQDFGVKGVQVEEIYDLQKAFEGTTYGFIFLFRWIEERRSRR
KTVTEDESFVTDDNIVNSIFFAQQMIPNSCATHALLSVLLNCEKVNLGETLSELKSYSKH
MNPENKGYAIGNIPELARAHNSHARRENSHLPEKQQGMTIRTMEAFHFVSYVPIHGHLFE
LDGLKPYPIDHGPWESNEDWTEKFRRVISERLGMATGGEPYHDIRFNLMAVVPDKVSLYE
HKLSTLKTNRQIVLEALQQLLGNPPKMVKVTNPNITTAEKEKCLAVVKKHGPVTSNITVP
METNESENIKSEYASETNKEIIPTVKSEVIDLTDDEPDVKVEAATREASTEVKPDTVKDL
NKVKIEPDIKMEIISANDVVNKNSNSCISTGQASVNEGIEVQISVASESDGVSTIIPTTA
STTDVTKPLTIETKFASSPGPSSESTDTASEVGSCFSSPSSSTMSTSAQNSPNVVGWEKN
AEGSSAAKEGESSSPSKSKTKFNSQQGFRPKDLIALLKNVENEIKLCEIKLQDEQEKIKK
YKIDNCRRTHNYDQFLCTFLSMLAEQGHLAELVQQHSFIKKRVPGHIGSKLSKLSQAAKK
KQTKAKRRR
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggataaagggtggcttgaactggagagcgatccaggacttttcaccttgctgctacaa
gattttggggtgaagggagtacaggttgaggagatatatgatctacagaaagcttttgag
gggacaacgtatgggtttattttcctgtttcgctggatagaggagagacgctcaaggagg
aaaactgtcacggaggatgaaagcttcgttacagatgacaacattgtcaacagcatcttc
tttgcgcaacagatgattccaaactcctgtgctacccatgctttactgagtgtcttattg
aactgtgagaaagtcaatcttggagaaacactctcagaactgaaatcttatagcaagcat
atgaatccagagaacaaaggctatgctataggtaacataccagagttggccagagctcac
aatagccatgcaagacgtgagaattcacatttaccagagaaacagcagggtatgacaata
agaacaatggaagctttccactttgttagttacgtcccgatccatggacacctgtttgaa
ttggatggactcaaaccatatcccatagatcatggaccctgggaaagcaatgaagactgg
acagagaaattccgtcgtgtgatctctgagagactaggcatggcaacaggaggagagcca
tatcatgatataagatttaacttgatggcagtggttccagacaaagtgagcttgtacgaa
cacaagctgagtacgctgaagacgaacagacagatagttcttgaagcactgcagcagctt
ttaggaaatccgcccaagatggttaaagtgaccaatcctaatataactacagctgagaag
gagaaatgtctagcagttgtgaagaaacatggacctgtaacatcaaacataactgttccc
atggagaccaatgaatcagaaaatatcaaaagtgaatatgcttcagaaacaaacaaagag
attattcctactgtgaaatctgaagtaattgacctgactgatgatgagcctgatgtaaaa
gtagaggctgcaacaagagaagcaagtactgaggtcaaacctgatacagtaaaagattta
aataaagttaaaattgaacctgatattaaaatggaaataatttcagcaaatgatgtagtg
aacaagaattcaaatagttgtataagtacaggacaagcttcagttaatgaaggaatcgaa
gttcagatctctgtagcatcggaatcagatggcgtgtctacaataataccaacaacagcc
tctacgacagatgttactaaacctctcactatagaaacaaaatttgcatcatcgcctggt
cctagcagtgaaagcacagatacggcatcagaggtgggcagttgcttcagttcacctagt
agcagcacaatgagcacctcggcacagaacagccccaatgttgtaggttgggagaaaaat
gccgaaggaagttcagcagctaaagaaggcgagagttcatcaccgtctaaatcaaaaact
aaattcaacagccaacaaggatttagaccaaaggatctgatagcgttactgaaaaatgta
gagaatgagataaaactgtgtgagataaaactacaggatgagcaagagaaaatcaagaaa
tacaagattgacaattgtcgtcgtacccacaactatgaccagttcctgtgcacgttcctg
tcaatgttagcagagcaaggtcatctcgcagaacttgtacagcaacatagctttataaag
aaacgcgtaccgggacatataggtagcaaactgtcgaagctgtctcaggcggcaaagaag
aaacaaacaaaagctaagcgaagaagatag
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