KEGG   Mercenaria mercenaria (northern quahog): 123533617
Entry
123533617         CDS       T07835                                 
Name
(RefSeq) cyclin-H-like
  KO
K06634  cyclin H
Organism
mmer  Mercenaria mercenaria (northern quahog)
Pathway
mmer03022  Basal transcription factors
mmer03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mmer00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    123533617
  09124 Replication and repair
   03420 Nucleotide excision repair
    123533617
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmer03021]
    123533617
   03400 DNA repair and recombination proteins [BR:mmer03400]
    123533617
Transcription machinery [BR:mmer03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     123533617
DNA repair and recombination proteins [BR:mmer03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     123533617
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N TFIIB Cyclin_C ESM4
Other DBs
NCBI-GeneID: 123533617
NCBI-ProteinID: XP_045171270
EnsemblRapid: LOC123533617
LinkDB
Position
12:complement(68685516..68702624)
AA seq 327 aa
MFASGSQKRHWMFTGVSEIDLLRKEANERFINIFGENMDENSRQENFLSPAEEKLLMRHF
EFILREFCKKFNPTMPKYVQGTALTYFKRFYIHNSIMDYHPRDLMLTCVYLSCKVEEFNV
SIGQFVGNLKGDREKFANIILGFELLLMDKLHYHLTVHNPFRPLEGFLIDLKTRYFKDKP
ESVERLRKNAEEFVERSLSTDVCLIYSPSQIALAGVIYSAGEEGISLDNYVTTVLLRNSP
TEEIRKMAQQIKRIKSLVKNQDPLQRELIGPVQRKLENCRNQANNPESEVYKRRLEEMFE
EEEEERSRKRAKIAHEEKEAERMLLGV
NT seq 984 nt   +upstreamnt  +downstreamnt
atgtttgcatcaggatcccagaaaagacactggatgtttactggagtgtcagagatagat
ttactgaggaaagaagccaatgaaagatttattaatatatttggagaaaatatggatgaa
aacagtagacaagaaaatttccttagtccagcagaggaaaaacttctgatgcgtcacttt
gagttcatcttgagggagttctgtaagaagtttaaccctacaatgccaaaatatgtacag
ggtacagcactaacctacttcaaaagattttatatccacaattctatcatggattaccat
cctagagatctcatgttgacatgtgtatacctgtcatgtaaagtcgaagaatttaacgtg
tctataggacagtttgttggcaacttgaagggtgatcgagagaagtttgctaacattatt
ctgggatttgaacttctgctgatggataaactacactatcacctcacagtgcacaaccct
ttcagaccgctggaaggatttcttatagatcttaaaactcgttatttcaaggacaaacca
gagagtgttgaaaggcttagaaaaaatgctgaagaatttgttgagaggtctctgtcaaca
gatgtctgccttatatattcaccttcacagattgcccttgctggagttatatatagtgct
ggagaagaaggaataagcctggataattatgttaccactgttctattgaggaattcccca
actgaggagattcggaaaatggctcaacagatcaagagaattaagagtctagtaaagaat
caagatcctctgcagcgagagctgattggtcctgtacagcggaagcttgaaaactgtcgc
aaccaggcaaataacccagaatctgaagtttacaaacgtcggttagaggagatgtttgag
gaagaggaagaagagagaagtcgtaaacgtgcaaaaattgctcatgaggagaaggaggct
gaaagaatgctgcttggagtttga

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