Mercenaria mercenaria (northern quahog): 123536206
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Entry
123536206 CDS
T07835
Name
(RefSeq) ATP-dependent RNA helicase DDX55-like isoform X2
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mmer03009
]
123536206
Enzymes [BR:
mmer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123536206
Ribosome biogenesis [BR:
mmer03009
]
Eukaryotic type
Pre-60S particles
Helicases
123536206
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
MuF_C
Inp1
Peptidase_C13
Motif
Other DBs
NCBI-GeneID:
123536206
NCBI-ProteinID:
XP_045175115
EnsemblRapid:
LOC123536206
LinkDB
All DBs
Position
17:44783474..44823728
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AA seq
583 aa
AA seq
DB search
MVDSWRNLSQTISETTFKSLEELKFEKPTPVQAACIPLLLSYKDVAAEAVTGSGKTLAFV
IPVFELLRKRETPLKKFEVGALIISPTRDLAQQIFEVVRCFGKEVPDLSVSLVIGGKNNH
QENENVANIIIGTPGRLEAMFEKKQGSQELARCVKSLEMLVLDEADRLLDLGFEASINTI
LSYLPKQRRTGLFSATQTAEVEKLIRAGLRNPVRVSIKEKARTQDSLSGDEIQRTPSTLK
NYYMILNSDEKLNQLVAFIQSHRKQKIMVFLSTCAGVDYFSKILQPLLKKSQLYCIHGKM
KNRKKVISRFKSQGGGVLVCTDVMARGIDIPEVNWVIQYDPPTSAAVFVHRCGRTARIGN
AGSAVVFLTPEEESFVEFIEINQKVPLHKMDKLETDHNYLPEVQTMAVNDRGVYEKGMRA
FVSFVQSYAKHECYMIFQMKKMDFGRLANGFGLIKAPKMPELKGEKMDNFYPVPIDTNDI
VYSDKGLEKQRQIKLQTETENKRKRLTRPPKSEAWSQKKDQRERKMKRKEIKEKKKEKRK
VELTEEDIDSLEDDFRMVKKLKNNKISQEEFDKEFSVDSDPEL
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggtcgactcgtggagaaatctttcgcaaacaatcagcgaaacaacgtttaagtcgttg
gaagagctcaaatttgagaaaccaactcctgtacaggcagcttgcattccacttttgctt
tcatataaggatgtcgccgccgaggctgtaactggaagcggaaaaacactggcatttgtc
attccagtttttgagttgttgaggaaacgtgaaacaccattgaaaaagtttgaagttgga
gctctgattataagtcctacacgtgatcttgcacagcagatctttgaagttgtgagatgt
tttggaaaagaagtccctgatttgtctgtatccctggtaattggaggaaaaaataaccat
caagaaaatgagaatgttgccaatataattattgggacaccaggaagactagaagccatg
tttgagaagaagcagggttcacaggagttggcacgatgtgtgaaatctttggaaatgttg
gtactagatgaagctgacaggttgttggatctgggttttgaggccagcataaacactatt
cttagttatctaccaaaacagagacggactggactattttctgccacacagacagctgaa
gttgagaaactgatcagggcaggactgaggaatccagttagagtctcaattaaggagaag
gcaaggacacaagacagtttgtcaggggatgaaattcagagaactccttccacactcaaa
aattattacatgattttgaacagtgatgaaaaattaaatcagttagtggcatttatacag
agtcatagaaaacagaagataatggtgttccttagcacatgtgctggggtggactatttc
tccaaaattttgcaacctttgttgaagaagtcacaattgtattgtatccacggtaagatg
aaaaacaggaagaaagttatatctaggttcaagtctcagggtggtggtgttctggtgtgt
acagatgtgatggcacgtgggatagacattcctgaagtgaactgggtcatacagtacgat
cctcctacgtctgctgctgtatttgtacacagatgcggaaggacagcacgtattggcaat
gctggcagtgctgtagtgtttttgactccagaagaggagagctttgtagagtttatagag
attaatcagaaagttcccctacacaaaatggacaaacttgaaacagaccataactactta
ccagaagttcagaccatggcagtcaacgatagaggagtatatgagaaaggaatgagggca
tttgttagttttgtgcaatcttacgctaaacatgagtgttacatgatatttcaaatgaaa
aaaatggactttggaagattagcaaatggatttgggctaataaaggcaccaaaaatgcca
gaattgaaaggcgaaaaaatggacaatttttacccagtgccaatagacactaatgatata
gtttacagtgacaaggggttagaaaaacagagacaaataaaattgcaaacagagactgaa
aataaaagaaaaaggttaactcgacctccaaaatctgaggcttggtctcagaaaaaggac
caaagagaaagaaaaatgaaaagaaaagagatcaaagaaaagaaaaaggaaaaaagaaaa
gttgaattgacagaagaagacatagattctttagaggatgattttaggatggtgaaaaag
ttaaagaataacaagatttcccaagaagaatttgacaaggaattttctgtagacagtgac
ccggaattatga
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