Mercenaria mercenaria (northern quahog): 123553107
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Entry
123553107 CDS
T07835
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47-like isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mmer01002
]
123553107
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmer04121
]
123553107
Enzymes [BR:
mmer01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
123553107
Peptidases and inhibitors [BR:
mmer01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
123553107
Ubiquitin system [BR:
mmer04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
123553107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
DUF6277
Motif
Other DBs
NCBI-GeneID:
123553107
NCBI-ProteinID:
XP_053398002
EnsemblRapid:
LOC123553107
LinkDB
All DBs
Position
4:99555066..99627995
Genome browser
AA seq
1464 aa
AA seq
DB search
MVVGDTTQVVPLEGASVADEPKVLCIVRDMVDPQANAIKHTMNLPASMSVQILLNEVAKQ
FGYMMGTISVHYERQTGSDVEELSLEQYTMSFLGDILSPGVKRHNFTICELEGKQPKKMA
PPPPPPPPNLGKPIEGSDAGASGSSRLDSSTYFSNNTSLEPRTAYNSVSSTSSASYSSDF
SYSSTFLKSETGYVGLVNQAMTCYLNSLIQTLYMTPEFRNAIYRFHFDSGKGVKNIPYQL
QRLFLLLQTSTKRAVETTDLTKSFGWDSSEVWQQHDVQELCRVMFDALEVTWRGTDQENL
VNQLYQGKMKDYVKCLECGNESARIDTYLDIPLVIRPFGSTTAYKSVTEALEAFVQPETL
EGRDQYFCEKCNKKCDAHKGLKFLSFPYLLTLQMKRFDFDYATMHRIKLNDKMTFPEVLN
LNYLTEDLTEEGTTEEKSPDVIETDSVQKDQCNDDAIDEGIEMEVSSSAGSINEDSNLSN
DTLNDRNAQHSNVKGPYVYELFSIMIHSGSAAGGHYYAYIKCLSDGQWYSFNDQHVSKIT
YDDIRKTYGGSSTTRGYYSSSYASSANAYMLMYRKIDKDRNIDFMCGEDFPEHVKVELRK
LNDKEEADRKQKEMDKSTCKIKIFCVHPSRKKKLDHKLEIHKDKTLSEATDLAYKIFELE
DSVTRDCCRIVKYDEYQDSLECSFDDSDDVAMETLLNGVKQSYSFDLLLETKRPEQKFQE
YKPGGVTVKVYVADLEKDTIIEPAATVRAYLVQTVQEFKTLVSQVLGLKQDDMRCVLERF
HNDLKLLYMPNKTLKSEGFFKTNKVYVELNATEEERNTQFDRSHFYTLLDRYQNTINIQV
SLPSLAEVSDYKRHSCARENSPLGQDSAVESGVNSSANSVDNGSEMCNHERRTFRSRENL
TDRESFCRDLDTEIRTLNLQSQLSQSDPNLYGSSRHSDGVSKGDILNSLHNRGSGSSLEC
QDSRSCSQSTQSTSTSAEFSLGNVNSVCEGNLESPDDVVVSNSDKECDLNATFSEKEQSN
DLEDCDLKEKLGSGEPVEHVFSESSLPSANLPKTTNSPEDENISVFKSESDIKGTSGWEK
HGRRQATTGWDESTGSTSACFDSMRDSQTTEDAEEEKRFFQAELCETDSDQRSLSVFVDK
RITLGCFKAELEQYVGVSANNFKVYRVYSNNQEFESIRLTETLSFLEDGRINIKLGRALK
NGEYRVKVFQLLVNETEPSKFLLDTIFARGMTVLDSKKMILPEIKLEHNLDVPLDRCRLR
KKTWKNPGTIYVDKQVYEEEIPIYPNWEVFLEILDGPEQMLSSAQLAVYLRRWYPSKYEL
GPFEEVVITEQTVEELKKKISELHGINTEDIEMAKGRGTFPYDVSVLEIHTDLDWNPPVQ
ALGMWPLYICDDGCLVYYRDSKEKLAELSDNMKKEIETKENTRLSKSAQRVTYSPRKERA
LKIYTEEPAPSNNLSASNASPDLD
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atggtagttggtgacaccactcaagtcgttccattagagggcgcatcagttgcagatgag
ccgaaggtactttgcatcgtgcgggacatggtagacccacaagctaatgctatcaagcat
actatgaacctgccggcctccatgtcagttcagatcctgctgaacgaggttgctaaacag
tttggctacatgatgggaactatctcggtacactatgagagacagacagggtctgatgtg
gaggagttaagcctagaacagtacacaatgagtttcctaggtgatatattgagtccaggt
gtgaaacgtcacaatttcacgatttgtgaattggagggaaaacagccaaagaaaatggct
ccaccgcctccacccccaccacctaaccttggcaagccgatagagggttctgatgcaggg
gcatccggctccagtaggcttgattcatcaacatatttcagcaacaacaccagcctggaa
ccaagaacagcatacaacagtgtatcatcaacttcctctgcctcatactcgtcagatttc
tcatactcgtcaactttcctgaagtcagagacaggttatgttggtctggttaatcaggca
atgacctgttacctaaacagcttaatacagacattgtatatgacacctgagtttcggaac
gccatctaccggttccattttgacagtggcaagggagttaaaaacataccatatcaatta
caaaggcttttcttactgctgcagacaagtacgaaaagagcagttgagacaacagatctt
actaaaagttttggctgggacagttcagaagtgtggcagcagcatgatgttcaggagttg
tgtcgggttatgtttgatgccctggaagtaacatggcgtggaacagatcaagaaaacctt
gtaaatcaactgtaccagggaaaaatgaaagattatgtcaaatgtttagagtgtggaaat
gaaagtgcgaggatagacacataccttgatatacctctagtcatacgaccttttggatct
accactgcctataaaagtgttactgaagcactggaagcctttgttcagccagagacttta
gaagggcgagatcagtatttctgtgaaaaatgtaacaaaaaatgtgatgctcacaagggc
ttgaaatttttatcgtttccttacttgctgacactacagatgaagaggtttgatttcgac
tatgctacaatgcataggatcaagttaaatgataaaatgacatttcccgaggtgctcaat
ctgaactatttaactgaggatttaacagaggaaggtacgacagaagagaaaagtcctgat
gtaatagagacagatagtgtgcagaaagaccaatgtaatgatgatgccattgatgaaggt
atagagatggaagtgtcaagttcagcgggatctattaatgaagattctaatctctccaat
gatactctaaatgacagaaatgctcagcattcaaatgtgaagggtccctatgtgtacgag
ttgttttctataatgatccattcaggaagtgcagccggtggacattactacgcctatatc
aaatgcctgagtgatggacaatggtacagcttcaatgatcaacatgtatcaaaaatcacc
tatgatgatataaggaaaacatatggaggcagttctactaccagaggatactattcttct
tcatacgcaagttcagccaatgcctacatgttgatgtacaggaaaatagataaagataga
aatatagatttcatgtgcggagaagactttccagaacatgtgaaagttgaactgagaaaa
ttgaatgataaggaagaagcagacagaaaacagaaagaaatggataaatccacttgcaag
ataaagattttctgcgtccatccttcacggaaaaagaaactagatcacaaacttgagatc
cacaaagacaaaacactgtcagaggccacagatctggcatataagatattcgagttagaa
gacagtgtgacacgtgactgttgtcggattgtgaagtacgacgaatatcaagattctctt
gaatgttctttcgacgactctgatgatgttgctatggaaaccttacttaatggtgtaaaa
cagagttacagctttgacctgctccttgaaacaaagagacctgaacagaaattccaggag
tataaaccaggaggtgtaacggtgaaggtatatgtggcagatttagaaaaagatactatt
atagagcctgcggccacagtgagggcatatcttgtacagactgtacaggaatttaaaaca
cttgtttcacaggtgttgggactgaaacaagatgatatgagatgtgtgttggaaagattt
cacaatgatcttaaacttctctatatgcccaataaaacattgaaaagcgaaggattcttt
aaaactaacaaggtgtatgtagaactaaatgcgacagaggaagaaaggaatacacagttt
gatagaagtcacttctataccctgttagacagatatcaaaacacaattaatatacaagtc
agtctaccttcactagctgaggtatctgactacaaaagacactcatgtgctcgagaaaat
tctccgctgggtcaggactcggcagttgaaagtggtgttaacagttcagcaaatagtgtt
gataatggaagtgaaatgtgcaatcatgaaagacgtacattcagatcaagagaaaatctg
acagaccgagagtctttctgtagggacctagatacagaaataagaactttaaacttacaa
tcacagttaagtcaaagtgatccaaatttatatggtagtagtagacactctgatggcgtt
tcaaagggtgacattttaaacagtttacataatcgagggtcagggtcgtcccttgaatgt
caagactcaaggtcatgtagtcaatccactcagtctacaagtactagtgcagaattcagt
ttaggaaatgtgaactctgtatgtgaaggaaatttggaatccccagatgatgttgtagta
tcaaacagtgataaagaatgtgaccttaatgcgacctttagtgaaaaagaacaaagtaat
gaccttgaggattgtgacctcaaggaaaagttaggaagtggtgaacctgttgaacatgtg
ttttcagaaagttcattacctagtgcaaatttgccaaaaactacaaattcacctgaagat
gaaaatatatcagtgtttaagtcagaatcagacattaagggcacgtcaggctgggagaaa
catgggcgtaggcaagctacgacaggctgggatgagtcaacagggagcacttcagcctgt
tttgattcaatgagagacagccagactacagaagatgccgaagaagaaaaaagattcttt
caggctgaactctgtgaaacagactctgatcaaagaagtctgtcagtgtttgtagataag
agaatcacgctgggatgtttcaaagcagaacttgaacaatatgtaggagtgtctgcaaat
aactttaaggtgtacagagtatactccaacaatcaagaatttgagagtatacgactcaca
gagacactgtcattcttagaggatgggaggattaatatcaaactaggtagagctttgaag
aatggagaatacagggttaaagtgttccagttactagtcaatgaaacagagccgtccaag
tttttgcttgatacgatatttgcacgagggatgacagtgttggactcgaagaagatgatt
cttcctgagataaaattagaacacaacctggatgttcctcttgacagatgtcgattgaga
aagaagacgtggaagaatcctggcactatttatgtggacaaacaggtgtatgaagaagaa
ataccaatctatcctaactgggaagtcttccttgagatcctcgacggtccagaacagatg
ttgtcatctgctcaacttgcagtgtatttgagaagatggtatccatccaagtacgagctt
ggaccgtttgaggaggttgtaattactgaacagacagtagaagaacttaaaaagaagatt
tcagaattacatggaataaacactgaagatatcgaaatggcaaagggtcgggggacattt
ccctatgatgtatctgtgttggagatacatacagacttagactggaaccctccagtgcag
gctctaggaatgtggccgttgtatatatgtgatgatggttgtctcgtgtactatagggac
agcaaggaaaaactggccgaactaagtgataacatgaagaaagaaatcgaaacgaaggaa
aataccagattgtccaagtctgcacaacgagtcacttacagtcccagaaaggaaagagcc
cttaaaatatacacagaagaacctgcacctagtaacaatctgtctgcgtcaaacgcttcc
ccagatctcgactaa
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