Mercenaria mercenaria (northern quahog): 123561482
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Entry
123561482 CDS
T07835
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 1-like
KO
K11832
ubiquitin carboxyl-terminal hydrolase 1 [EC:
3.4.19.12
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
123561482
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mmer01002
]
123561482
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmer04121
]
123561482
03400 DNA repair and recombination proteins [BR:
mmer03400
]
123561482
Enzymes [BR:
mmer01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
123561482
Peptidases and inhibitors [BR:
mmer01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
123561482
Ubiquitin system [BR:
mmer04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
123561482
DNA repair and recombination proteins [BR:
mmer03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
123561482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
ZYG-11_interact
NOGCT
ANIS5_cation-bd
Motif
Other DBs
NCBI-GeneID:
123561482
NCBI-ProteinID:
XP_045209815
EnsemblRapid:
LOC123561482
LinkDB
All DBs
Position
10:complement(56761586..56810371)
Genome browser
AA seq
1100 aa
AA seq
DB search
MSLGNAAVNMGVPDTDSTGPMKKRQRLSLKAGRQKCVTPAQPPATDASNNASKTSPKQES
ERSDSSATMSSVSWTDSSTSASTSSSSSKVDMRVPAVASLENFGNTCFMNSVMQVLRYTP
GFLHNLALLYQDVQASEKIKRKNKKSEDEPSSFAEDNNKRCCKVVKNVYKVYRDLSALEE
KYDEVASDDVMSMAVKPNKILQAIRELNPMYEGHMQHDAQEFLRCFLCYFQDAEKEVQKF
YSQLPHTLTPKINPIMERFLASSNTSQETKDKIVKIVNEVTENEATERSSTENVIEAEKV
KVNLFPKSEIKTETAKSPRKVQVAPKVGDTAGVVDEVNEKVTHVGASTVVNQGDVIHVGL
KAVTKLPSPGEIGESAESELHDSKGKQQREKASARKDRRCKPYDKSHKGQGKNKDKSEKL
DNRRKGRKALVKETNQLSIIEGFTKTYSSKKRLGMRGAVLKKSAEELFDEVSGLEQTANK
DSDTDSQRESTSPARSINSDNSDQGRSCDTENKQDIPSTLVEQSESGKLKDEKSENNISK
SDAAVHCKEQKVSTNSSYQDVFTQFLSALPEEDSDSVEMQSDSDNEDIVLKKKKEKELRD
SPRRSPRKVASEMLRTSPRKFEISKLALTSKSESSVMTVKHRLEFSGDKIHREGNPETEN
NTNTSHNATASDTSTTVSTPTVKSEIVDIESEGKMEKNEESPAIPMALLPVVKLENCDYI
LSEDGTSVSFAYATKCLSPLKSGCRSSSGSSNYLKQRTQLSMDISDEEEFKRALAEMFNS
PVKSRSKYDLIERTFQGTMMLRTRCLQCESSRERQEDFHDVSVPVRIEKSDSDTEDEDDI
QSKCDLLDLIEASTEVEKLLEENKYYCDECKTYVEAERSMHYDVMPDILTLHLKRFSSET
GNPSNITKINDHVDIPLNLPCLRYKCAQSCLRPDHRYRLYGIVTHSGVTLTSGHYLAYVR
SLPNQPTDNVPSRQQTLIGITDNENKSSEISENLLNKMDKSMPATRRKMGVATKLPSRFS
DNVIANTKVKAFESVAVKKMKPDLVATLLPSKHYDGEWFECDDETVRVFDESDFVELLSE
KSGSLLGTPYLLFYHKATMC
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgagtttagggaatgctgctgtaaatatgggtgtgccagacacagacagtacaggacca
atgaaaaagcgtcagcggctatcattgaaggcaggacgacagaaatgtgtgacacctgct
cagcctccagcaacagatgccagtaacaatgccagcaaaacatcaccaaaacaagagagt
gagagatcggacagttctgcaacaatgagtagtgtgtcatggactgacagcagtacctca
gctagtacctccagctccagcagtaaagttgatatgagagtgcctgctgtagcttcatta
gaaaactttgggaacacatgctttatgaactcagtaatgcaggtgctcaggtacacgcct
ggattcctacataacctggcacttctctaccaagatgtacaggcatccgagaaaatcaaa
cggaaaaataaaaagagcgaagatgaaccatcaagttttgcagaggacaataataagaga
tgctgtaaagttgtcaaaaatgtctacaaggtataccgagatctgtcggcattggaggaa
aagtatgatgaggtagcatctgatgatgtgatgtccatggctgtcaaaccgaataaaata
ttacaagcaataagggaattgaacccgatgtatgaaggacacatgcaacatgatgctcag
gagtttctccgctgctttctttgctactttcaagatgcagaaaaagaagtgcaaaaattc
tacagtcaacttcctcacactttaactccaaaaatcaatcccattatggagagatttctg
gccagctcaaataccagccaagaaacaaaagacaaaattgtgaaaattgtgaatgaagtg
actgaaaatgaagctactgagagaagtagcacagaaaatgtgatagaagcagagaaggtg
aaagttaacttgtttccaaagtcagaaataaaaactgagactgcaaagtcacctagaaaa
gtacaagttgcacctaaggtaggagatactgcaggagttgttgatgaagtaaatgagaaa
gtcactcatgttggagctagtacagttgttaatcaaggtgatgttattcatgttggcttg
aaagccgttacaaaattaccatctcctggagagattggtgaaagtgctgaaagtgagtta
catgacagtaagggtaaacaacagagagaaaaggcatcagccaggaaagacagaagatgt
aagccatatgataaaagtcataagggtcaaggaaagaataaagacaaaagtgagaagtta
gataatcgaaggaaaggtagaaaagctctggtgaaagaaaccaatcagctttcaatcatt
gaagggtttaccaaaacatactcatccaagaaaagacttggaatgagaggggctgttctg
aaaaagtcagctgaggaactgtttgatgaagtaagtggtttagaacaaactgcaaacaaa
gactctgatacagattctcaaagagaaagtacttcaccagctagatcgattaacagtgat
aatagtgatcaaggcagaagctgtgataccgaaaacaaacaagatataccctccacttta
gttgagcagtcagagtccggaaagctgaaggatgaaaaatctgaaaataacatttcgaag
tctgatgcagcagttcattgtaaagagcagaaagtgtcaacaaacagttcctaccaagat
gtgtttacccaatttctttctgcattaccagaagaagattctgattctgtagaaatgcag
tctgattctgataatgaagacattgttttaaagaagaagaaagaaaaggagctccgggat
tcaccaagaaggtcacctagaaaggtggcttcggagatgttaagaaccagtccacgaaag
tttgaaatatccaagcttgctctaacctctaaatctgagtcttctgtgatgactgtaaaa
caccggctagagttttcaggagacaaaatacacagagaaggaaacccggaaacagaaaat
aacactaatacaagtcataatgccacagcatctgacacatctaccactgtatccacacct
actgtgaaatctgaaatagttgacattgaatctgaaggtaaaatggaaaagaatgaagaa
tctccagcaataccaatggctctattaccagtagtgaaactagagaactgtgactatatc
ctcagtgaagacgggacctcagttagctttgcatatgctactaagtgcctttcgccattg
aaaagtggttgcagaagcagctctgggtcgagtaattacctgaaacaaagaacccaactc
tctatggacatatcagatgaagaagagttcaaaagggcactagcagaaatgttcaactct
cctgtcaaaagcagatccaaatatgaccttattgaaagaacattccagggaacaatgatg
ttacgtacacgatgtttacagtgtgagtcatccagagaacggcaggaagattttcatgat
gtcagtgtaccagttagaattgaaaagtcagacagcgacactgaagatgaagatgatatt
cagagcaaatgtgatctactggatttgattgaggcttcgacagaggtagaaaaattgctg
gaagagaacaagtactactgtgatgaatgtaaaacatatgtggaagcagagcgttcaatg
cactatgatgtcatgccagatattcttactctgcatctcaagcgtttctcatcagagact
gggaatccaagtaacatcacaaagatcaatgatcatgttgatatacctctgaatctgcct
tgtctacgttacaaatgtgcacagtcctgtctcaggccagatcataggtataggttgtat
ggtatagtgacgcattctggagtaactctcacctcgggacactacttagcttatgtaaga
tcattaccaaatcaaccaacagacaatgttcccagtagacaacaaacactaataggaatt
acagacaatgaaaataaatctagtgaaataagtgagaatttgcttaacaaaatggataaa
tcaatgccagctactcggcgcaagatgggtgtcgctacaaagttaccatctcgtttcagt
gataatgtgatagctaatacaaaagtaaaagcatttgaatctgttgctgtgaaaaaaatg
aagccagatcttgtcgctaccttgttgccaagtaaacactatgatggagaatggtttgaa
tgtgatgatgaaacagttcgtgtttttgatgaatccgattttgtggaactattatcggaa
aaatctggatctctacttggaactccatatctcctcttttatcacaaagcaactatgtgt
taa
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