Mercenaria mercenaria (northern quahog): 123563673 Help Entry 123563673         CDS       T07835                                  Name (RefSeq) DNA ligase 1-like   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism mmer  Mercenaria mercenaria (northern quahog) Pathway mmer03030   DNA replication mmer03410   Base excision repair mmer03420   Nucleotide excision repair mmer03430   Mismatch repair Brite KEGG Orthology (KO) [BR:mmer00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     123563673    03410 Base excision repair     123563673    03420 Nucleotide excision repair     123563673    03430 Mismatch repair     123563673  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:mmer03032]     123563673    03400 DNA repair and recombination proteins [BR:mmer03400]     123563673 Enzymes [BR:mmer01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      123563673     6.5.1.6  DNA ligase (ATP or NAD+)      123563673     6.5.1.7  DNA ligase (ATP, ADP or GTP)      123563673 DNA replication proteins [BR:mmer03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     123563673  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      123563673 DNA repair and recombination proteins [BR:mmer03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      123563673    NER (nucleotide excision repair)     Other NER factors      123563673    MMR (mismatch excision repair)     Other MMR factors      123563673 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C Motif Other DBs NCBI-GeneID:  123563673 NCBI-ProteinID:  XP_053390607 EnsemblRapid:  LOC123563673 LinkDB All DBs Position 2:33688151..33801384 Genome browser AA seq 1058 aa AA seqDB search MINFRLIRSGKFVYTNISFVLGPSRVMQRSIASFFSSAPKKDDTKTKDIKTAEKSPVKKP DKSPLKQKNVSPSKILDDSPIKAPARKRARIIESDEEEENVQVQEVEEKGEKKVEQRLEK VIEEKQKTKDDEKESQDSGVSSQSPERSSTITPVKSPFPARKTARKSIGGSARKKIPSPI TERQEEEMITEESEKTDQIEENPAKDESKEPESKVEVDVNTITDETDKAVELEEKKIEDS EKDNEEESKNEDTAEEEPSGNESEDIPKGHKKKSKPGKGVATPKGQKRKSSKKEESPKEK NSKTETQKEKNSKTETPKSVKKVKEEPKVSQKGKAPVHGFFSPKSSAKVKEEPSNTESEK SEDKPEKSEDKDVAKPVKQETEKKSAVNPFASMMGKKDESNTTYNPTKSNYHPIDDACWK HGEKVPYLALAKTFEAIENVSARLKIIEILCNFFRSVIVLSPGELLPSVYLCLNKLAPAY EGVELGIGETVLMKAIAQSTGRSMDKIKSDAQEKGDLGIVAENSRSTQRTMFAPQNLTIP AVFTKLKEIATMTGNSVMSKKIDKIKGMFVACRQSEARYLIRSLGGKLRIGLAEQSVLTA LGNAIFLTPPGQEYPPEVLNAGKGMSSDTLKQKMEETALVIKTTYCECPNYGAIVPCLLE HGIEELPKRCKLTPGIPLKPMLAHPTKGISEVLARFENNDFTCEYKYDGERAQIHLLENG KIQIYSRNSEDNTSKYPDIISRLPKCLGEDVKSCVLDTEAVAWDPEKKQILPFQVLTTRK RKDADAAEIKVQVCVYAFDLLYLNGESLVRQPFRRRRELLRSSFKEVDGEFTFATSMISS NTEEISEFLEESIKGNCEGLMVKTLDVDATYEIAKRSHNWLKVKKDYLEGMGDTLDVLVM GGYLGTGKRTGRYGGFLLACYDDENEEYQCICKIGTGFKDEDLEKHTAFFKEHVIEKPKS YYKWDKSVECDHWFEPVQVWEIKAADLSVSPVHKAAAGMVDPEKGISLRFPRFLRIRDDK KPEEATAASQVADMYRSQSQIQNQTKTKSKAEEEEDFY NT seq 3177 nt NT seq  +upstreamnt  +downstreamnt atgataaacttccgtctgattcgtagcgggaaatttgtttacacaaatatttcttttgtt ttgggacctagtagagtcatgcagcggtctatagcatcattcttctcctcagccccaaag aaagatgacacaaaaacaaaagacatcaaaacagcagagaaatctcctgtgaaaaagcca gacaagtctcctttgaaacagaaaaatgtgtcgccgtcaaagatccttgatgactcacca atcaaagctccagctagaaaacgtgcacgtattatagagagtgatgaagaggaggaaaat gtgcaggtccaagaagtggaggagaagggagagaagaaagtggaacagaggcttgaaaaa gttatagaagagaaacagaagacaaaggatgatgagaaggaaagtcaagattctggagta agttcacagtccccagagaggtcatcaacaattacaccagtgaaatctcctttccctgct cgtaaaacagcacggaagagtataggtggcagtgcaagaaagaagatacccagccctatc acagagagacaggaggaagagatgattactgaggaatctgagaaaactgaccaaattgag gaaaacccagcaaaagatgaaagtaaagaacctgaatcaaaagtagaggttgacgtaaat actataacagatgaaactgataaagcagttgagttggaagaaaaaaagattgaagacagt gaaaaagacaatgaggaagaaagtaaaaatgaagatacagcagaagaagagccttctggg aatgagagtgaggacatccccaagggacacaaaaagaaaagtaaaccggggaaaggggta gcaacaccaaaaggtcagaagagaaaatctagcaaaaaggaagaaagtcctaaagaaaag aatagcaaaactgaaacccaaaaagaaaagaatagcaaaactgaaactccaaaatctgtt aagaaagtgaaagaagagccaaaggtttcacagaaggggaaagcaccagtacatggtttc ttttctccaaaatcaagtgccaaggtaaaagaagaacctagcaacacagaaagtgaaaag tcagaggataaacctgagaagtctgaggataaagatgttgctaagcctgtaaaacaagaa acagagaagaaaagtgctgttaatccgtttgccagcatgatgggaaagaaagatgagtct aacacaacatacaacccaaccaagtctaactaccatcctatagatgatgcctgctggaaa catggtgaaaaagtgccctatcttgctttagcaaagacatttgaagccattgagaatgtg tcagcaaggttaaaaattatagaaattttgtgtaacttctttcggtcagtgatagtactc tcccctggtgagttgttgcccagcgtgtacttgtgcttgaacaaattggcaccagcctat gaaggtgtagaacttggtataggagaaacagttcttatgaaagctatagctcaaagtaca ggtcgcagtatggataagatcaaatcagatgcacaagaaaaaggagatctaggtattgtt gcagagaatagtcgcagtacccagaggacaatgtttgcaccacagaatcttacaatacct gcagtattcaccaaactgaaggagatagctactatgacaggcaactctgttatgtcaaag aagatagacaagattaagggcatgtttgtggcgtgcaggcagtctgaggctagatacctc atcaggtctcttggtggcaaactgaggattggtctggcagaacagagtgttcttactgca ctaggaaatgctatattcctaacaccacctggtcaagagtatccaccggaggttctgaat gcaggaaagggaatgagctccgacacactgaaacagaaaatggaggaaacagctctagtc atcaaaactacctactgtgagtgtcctaactatggagctatagttccttgcctgttggaa catggtattgaagaattacccaagagatgtaaattgacaccaggtattccactaaagcct atgttggcacatcctactaaaggtatcagcgaggtgttagccaggtttgaaaacaacgat tttacatgtgaatacaaatatgatggtgaaagagcacagatacatttattagagaatggt aaaatacagatatatagtaggaactctgaagataacaccagtaaataccctgatattata tcacggctaccgaaatgtttaggagaagatgtcaaatcatgtgtactagatacagaggca gtggcctgggacccagaaaagaaacaaattctacctttccaggtccttactacaagaaaa agaaaggatgcagatgcagcagagattaaagtacaagtgtgtgtttatgcgtttgacttg ctctacctcaacggagaatctctggtacgtcagccattccggcggagacgagagttgctg aggtcatcgtttaaagaagttgatggcgagtttacgtttgctacgtcaatgatttcctca aatacagaggagatctcagaattcttggaggagtccattaaaggaaattgtgaaggttta atggtgaaaacacttgatgtagatgctacatatgaaatagctaaacggtcacataattgg cttaaggttaaaaaagattatttggaaggtatgggagacactcttgatgttttagtgatg ggtgggtacctgggcacaggtaaacgtacaggtagatacggaggattcctgcttgcatgc tacgatgatgaaaatgaagaatatcaatgtatctgtaagattggtacaggttttaaagat gaagatttagagaagcatacagcattctttaaggaacatgttatagaaaaacccaaatcc tactacaaatgggacaagtctgtagagtgtgatcactggtttgagccggtacaggtgtgg gagatcaaggctgctgacctgtctgtgtcacctgtacataaagctgctgctggaatggtt gatcctgaaaagggtatatcactgaggtttccacggtttctaaggatacgagatgacaag aaacccgaggaggcgacggcagcatcccaggtagcagatatgtacagaagtcagtcccag atacagaatcaaacaaagacaaaatctaaagccgaggaggaggaagacttctactga

DBGET integrated database retrieval system