Mercenaria mercenaria (northern quahog): 123563892
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Entry
123563892 CDS
T07835
Name
(RefSeq) RNA binding protein fox-1 homolog 3-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmer03041
]
123563892
Spliceosome [BR:
mmer03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
123563892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
123563892
NCBI-ProteinID:
XP_045212960
EnsemblRapid:
LOC123563892
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All DBs
Position
2:48701218..48755755
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AA seq
411 aa
AA seq
DB search
MHVNGMSLYSNGLGMGTFQVIGVQSYPQKMVQADNISEMKVLAVKSDVTDATAEANKENE
HMVQNQLPPTYQYAQTPGLEEYQPVMVQTPVSSLPAEFKSDQSVFTTTAITSVTANGGVE
QQTVRARGNLNQTDLVEGEAVPQQQSPTEAGSKVEAVSPGAAQGPKRLHVSNIPFRFREA
DLRNLLGQFGPILDVEIIFNERGSKGFGFVTFQNSVDADRAREKLNGTVVEGRKVEVNNA
TARVMTKKTAVAPTIPNVISPVSAAALRGVALTRGRATALAARGMYNAAAAAQLQAAALR
QPTPLPTATALPYATMQYAAMDPALLATYAAADRYQLVTSQPLAAGVPLSAARYAVPAIA
GAGGVTYAAAGYTGRELAAATADPLLGHSIGPVPGYGATVYRGAYQRFTPY
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtcaatggaatgagtctttattcaaatggtttaggaatgggaacttttcaagtc
atcggtgttcaatcttatccacaaaagatggtacaggcagacaatatttctgaaatgaaa
gttttagctgtaaaatctgatgttactgatgcgacggctgaagcaaacaaagaaaatgag
cacatggtgcagaatcaattacccccgacataccagtatgctcaaacccctgggcttgaa
gaatatcaaccagtcatggtgcaaacaccagtatcctcccttccagcagagttcaaaagc
gaccagtccgtgttcacaaccacagccatcacctcggtgacggcaaatgggggcgtagag
cagcagacggtaagagccaggggaaacttaaatcagacagatctagtcgagggcgaggca
gtaccacaacagcagagcccaacagaagccggttccaaagtagaagccgtgtcacccgga
gcagcacaaggaccaaagagattgcatgtgtcaaatataccattcagatttagagaagca
gatttgcggaatttattagggcaatttgggcctattttagatgtagaaatcattttcaat
gaaagagggtctaagggatttggtttcgtaactttccaaaatagcgtggacgctgacaga
gcacgagagaaactgaacggtacagtggttgagggacgcaaagttgaggtcaacaatgct
actgctcgtgtaatgaccaaaaaaactgctgttgcacctactatcccaaatgttatatcg
ccagtatctgcagccgcgctgcgaggtgtggcgttaacaaggggtagagctacggccctg
gcggcacgtggaatgtacaacgcagcagcagctgctcagctgcaagctgcagcactccga
caaccaactcctcttcctactgccacagctttgccatatgccaccatgcagtatgcagcc
atggatccagcattattagcgacatatgctgctgccgataggtatcagctagtcacctca
cagccattggcagcaggtgttcctctgtcggctgcacgatatgctgtccctgcaattgcc
ggtgctggtggtgttacatacgcagcagcagggtacacaggccgtgaattagcagcggcg
acagcagatcctctccttgggcacagtattggaccagtccctggatacggggcaacagtt
tacagaggtgcataccagaggtttactccatactga
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