Methanococcoides methylutens: MCMEM_0763
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Entry
MCMEM_0763 CDS
T03913
Name
(GenBank) Ribonuclease PH
KO
K11600
exosome complex component RRP41
Organism
mmet
Methanococcoides methylutens
Pathway
mmet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MCMEM_0763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmet03019
]
MCMEM_0763
Messenger RNA biogenesis [BR:
mmet03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MCMEM_0763
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
MCMEM_0763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Big_2
Motif
Other DBs
NCBI-ProteinID:
AKB84816
UniProt:
A0A0E3SQB5
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All DBs
Position
799676..800701
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AA seq
341 aa
AA seq
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MSDKPEKFIDENGIRLDGRRADEIRPMTVEMGVLSRADGSCYLEWGNNKVLAAVYGPREL
HPRRLQRPGEALVRYRYNMAAFSVEDRIRPGPSRRSTEISKVSGEAFEPVVMTQYYPSAV
IDVFAEVLQADAGTRTAAINAATLALVDAGIPMKGLVAACAVGKVDGQLVLDLNKPEDNY
GDADLPIAMTEDGDITLLQMDGNLTVDEINRGIEMVKKGCEQIFEIQKAALMSKFGTIEE
EEVLEDAELQAELESEEEEVSEAVEEEEAVEENEDLEDEEDEEVEAAEEAEAMFEEDVTE
FEVTEAEDEEEAEAVEEELSEEAELDESASVPEEEGEKYEQ
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataaaccggaaaaatttattgatgagaacgggatccgccttgacggcaggcgt
gctgatgagatccgccctatgaccgttgagatgggcgtgctctcaagggctgatggttcc
tgttatctcgaatggggtaacaacaaggtccttgctgctgtctatggtccaagggaactc
catccacgcaggcttcagcgccctggtgaggctctggtgaggtacaggtacaacatggca
gctttctctgtagaggaccgcataaggcctggtccaagcaggagaagtactgagatatca
aaggtaagcggagaagcattcgaacctgttgtcatgacgcagtattacccatctgctgtt
attgatgtgtttgcagaggtccttcaggctgatgccggaacaaggacagctgctatcaat
gctgcaacacttgcattggttgatgccggtattcctatgaagggactggtagctgcctgt
gctgtcggtaaggtggacggtcagcttgttcttgaccttaacaaacctgaggacaactat
ggtgatgctgatcttcctattgcaatgaccgaggatggcgacattactctgttgcagatg
gatggtaaccttactgttgatgagatcaacaggggtatcgagatggtaaagaaaggctgt
gagcagatatttgagatacagaaagctgctcttatgtcaaagttcggtaccattgaagag
gaagaggtcctggaagacgctgaacttcaggctgagcttgagtccgaggaagaagaggtt
tccgaagcagttgaggaagaggaagctgttgaagaaaacgaagaccttgaagatgaagaa
gacgaagaggtcgaggctgctgaagaggctgaagctatgttcgaagaagacgtcactgaa
tttgaagtgaccgaggctgaggatgaagaagaggcagaggcagtcgaggaagaactctct
gaggaagcagaattagatgaaagtgcttcagtgcctgaggaagaaggtgagaaatatgag
caatga
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