KEGG   Methanococcoides methylutens: MCMEM_0763
Entry
MCMEM_0763        CDS       T03913                                 
Name
(GenBank) Ribonuclease PH
  KO
K11600  exosome complex component RRP41
Organism
mmet  Methanococcoides methylutens
Pathway
mmet03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mmet00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MCMEM_0763
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmet03019]
    MCMEM_0763
Messenger RNA biogenesis [BR:mmet03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     MCMEM_0763
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     MCMEM_0763
SSDB
Motif
Pfam: RNase_PH RNase_PH_C Big_2
Other DBs
NCBI-ProteinID: AKB84816
UniProt: A0A0E3SQB5
LinkDB
Position
799676..800701
AA seq 341 aa
MSDKPEKFIDENGIRLDGRRADEIRPMTVEMGVLSRADGSCYLEWGNNKVLAAVYGPREL
HPRRLQRPGEALVRYRYNMAAFSVEDRIRPGPSRRSTEISKVSGEAFEPVVMTQYYPSAV
IDVFAEVLQADAGTRTAAINAATLALVDAGIPMKGLVAACAVGKVDGQLVLDLNKPEDNY
GDADLPIAMTEDGDITLLQMDGNLTVDEINRGIEMVKKGCEQIFEIQKAALMSKFGTIEE
EEVLEDAELQAELESEEEEVSEAVEEEEAVEENEDLEDEEDEEVEAAEEAEAMFEEDVTE
FEVTEAEDEEEAEAVEEELSEEAELDESASVPEEEGEKYEQ
NT seq 1026 nt   +upstreamnt  +downstreamnt
atgagtgataaaccggaaaaatttattgatgagaacgggatccgccttgacggcaggcgt
gctgatgagatccgccctatgaccgttgagatgggcgtgctctcaagggctgatggttcc
tgttatctcgaatggggtaacaacaaggtccttgctgctgtctatggtccaagggaactc
catccacgcaggcttcagcgccctggtgaggctctggtgaggtacaggtacaacatggca
gctttctctgtagaggaccgcataaggcctggtccaagcaggagaagtactgagatatca
aaggtaagcggagaagcattcgaacctgttgtcatgacgcagtattacccatctgctgtt
attgatgtgtttgcagaggtccttcaggctgatgccggaacaaggacagctgctatcaat
gctgcaacacttgcattggttgatgccggtattcctatgaagggactggtagctgcctgt
gctgtcggtaaggtggacggtcagcttgttcttgaccttaacaaacctgaggacaactat
ggtgatgctgatcttcctattgcaatgaccgaggatggcgacattactctgttgcagatg
gatggtaaccttactgttgatgagatcaacaggggtatcgagatggtaaagaaaggctgt
gagcagatatttgagatacagaaagctgctcttatgtcaaagttcggtaccattgaagag
gaagaggtcctggaagacgctgaacttcaggctgagcttgagtccgaggaagaagaggtt
tccgaagcagttgaggaagaggaagctgttgaagaaaacgaagaccttgaagatgaagaa
gacgaagaggtcgaggctgctgaagaggctgaagctatgttcgaagaagacgtcactgaa
tttgaagtgaccgaggctgaggatgaagaagaggcagaggcagtcgaggaagaactctct
gaggaagcagaattagatgaaagtgcttcagtgcctgaggaagaaggtgagaaatatgag
caatga

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